RNA–Protein interactions for RNA: ENST00000568877.5

COMMD4-224, Transcript of COMM domain containing 4, humanhuman

TSL 2

Gene COMMD4, Length 770 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-224ENST00000568877 FSCN3Q9NQT6 498 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 GDF3Q9NR23 364 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 SNX11Q9Y5W9 270 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 MAD1L1Q9Y6D9 718 aa16.63■□□□□ 0.25
COMMD4-224ENST00000568877 SPTY2D1-AS1A0A0U1RR47 76 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 FAM237BA0A1B0GVD1 139 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 CCDC162PA2VCL2 907 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 ARHGAP33O14559 1287 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 UGT1A9O60656 530 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 BANF1O75531 89 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 UGT1A6P19224 532 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 UGT1A1P22309 533 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 UGT1A4P22310 534 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 KELP23276 732 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 HTR1BP28222 390 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 UGT1A3P35503 534 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 UGT1A5P35504 534 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 FZD2Q14332 565 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 SF3A2Q15428 464 aaKnown RBP16.62■□□□□ 0.25
COMMD4-224ENST00000568877 TEX35Q5T0J7 233 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 MACC1Q6ZN28 852 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 TMEM135Q86UB9 458 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 BTN2A2Q8WVV5 523 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 GLYATL1Q969I3 302 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 LRRC39Q96DD0 335 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 EBNA1BP2Q99848 306 aaKnown RBP16.62■□□□□ 0.25
COMMD4-224ENST00000568877 FAM129AQ9BZQ8 928 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 ERVMER34-1Q9H9K5 563 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 UGT1A7Q9HAW7 530 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 UGT1A10Q9HAW8 530 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 UGT1A8Q9HAW9 530 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 PARD6AQ9NPB6 346 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 ZDHHC18Q9NUE0 388 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 TMPRSS11EQ9UL52 423 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 SLC30A1Q9Y6M5 507 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 MYLKQ15746 1914 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 SCN8AQ9UQD0 1980 aa16.62■□□□□ 0.25
COMMD4-224ENST00000568877 TMEM202A6NGA9 273 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 E7ESA3 106 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 GPR39O43194 453 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 SLC25A14O95258 325 aaPredicted RBP16.61■□□□□ 0.25
COMMD4-224ENST00000568877 ENGP17813 658 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 PAMP19021 973 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 ITGALP20701 1170 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 TGM1P22735 817 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 ELK3P41970 407 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 PRAMEP78395 509 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 PDIA2Q13087 525 aaKnown RBP16.61■□□□□ 0.25
COMMD4-224ENST00000568877 NFATC2Q13469 925 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 ANKRD20A4Q4UJ75 823 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 ZRANB3Q5FWF4 1079 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 AFTPHQ6ULP2 937 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 IL27RAQ6UWB1 636 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 ENPP7Q6UWV6 458 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 CENPUQ71F23 418 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 SNX20Q7Z614 316 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 TRIM74Q86UV6 250 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 IFT20Q8IY31 132 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 OR6P1Q8NGX9 317 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 IFT81Q8WYA0 676 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 WDR92Q96MX6 357 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 TRIM56Q9BRZ2 755 aaKnown RBP16.61■□□□□ 0.25
COMMD4-224ENST00000568877 NAT9Q9BTE0 207 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 FOXP3Q9BZS1 431 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 SMOXQ9NWM0 555 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 TEX264Q9Y6I9 313 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 RPS6KL1Q9Y6S9 549 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 SDK1Q7Z5N4 2213 aa16.61■□□□□ 0.25
COMMD4-224ENST00000568877 FRYLO94915 3013 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 BPTFQ12830 3046 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 OR51F1A6NGY5 319 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 AGAP14A8MT82 685 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 EIF3HO15372 352 aaKnown RBP eCLIP16.6■□□□□ 0.25
COMMD4-224ENST00000568877 USP1O94782 785 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 GOT2P00505 430 aaKnown RBP16.6■□□□□ 0.25
COMMD4-224ENST00000568877 POLBP06746 335 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 PGAM1P18669 254 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 CA5AP35218 305 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 TUBB4BP68371 445 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 CACNG1Q06432 222 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 EIF2B5Q13144 721 aaKnown RBP16.6■□□□□ 0.25
COMMD4-224ENST00000568877 HLA-BQ31612 363 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 GPR33Q49SQ1 333 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 HP1BP3Q5SSJ5 553 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-224ENST00000568877 KIAA0930Q6ICG6 404 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-224ENST00000568877 MICALCLQ6ZW33 695 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 PARGQ86W56 976 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 PHYKPLQ8IUZ5 450 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 CCNJLQ8IV13 435 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 IGDCC3Q8IVU1 814 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 OR56A4Q8NGH8 313 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 OR4L1Q8NH43 312 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 ZNF669Q96BR6 464 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-224ENST00000568877 ULK4Q96C45 1275 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 SGSM3Q96HU1 749 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 FCRL3Q96P31 734 aaPredicted RBP16.6■□□□□ 0.25
COMMD4-224ENST00000568877 GTPBP2Q9BX10 602 aaKnown RBP16.6■□□□□ 0.25
COMMD4-224ENST00000568877 PHACTR1Q9C0D0 580 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 FAM96AQ9H5X1 160 aa16.6■□□□□ 0.25
COMMD4-224ENST00000568877 ARFGAP3Q9NP61 516 aa16.6■□□□□ 0.25
Retrieved 100 of 20,778 RNA–protein pairs in 48.9 ms