RNA–Protein interactions for RNA: ENST00000566635.5

HERC2-208, Transcript of HECT and RLD domain containing E3 ubiquitin protein ligase 2, humanhuman

TSL 1 (best)

Gene HERC2, Length 2,114 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERC2-208ENST00000566635 CNTN1Q12860 1018 aa17.58■□□□□ 0.4
HERC2-208ENST00000566635 ATP13A5Q4VNC0 1218 aa17.58■□□□□ 0.4
HERC2-208ENST00000566635 CTSL3PQ5NE16 218 aa17.58■□□□□ 0.4
HERC2-208ENST00000566635 LIPIQ6XZB0 460 aa17.58■□□□□ 0.4
HERC2-208ENST00000566635 Q6ZVL8 140 aa17.58■□□□□ 0.4
HERC2-208ENST00000566635 ERN2Q76MJ5 926 aaKnown RBP17.58■□□□□ 0.4
HERC2-208ENST00000566635 ZNF398Q8TD17 642 aa17.58■□□□□ 0.4
HERC2-208ENST00000566635 SCAMP4Q969E2 229 aa17.58■□□□□ 0.4
HERC2-208ENST00000566635 BIRC8Q96P09 236 aa17.58■□□□□ 0.4
HERC2-208ENST00000566635 PLEKHG4BQ96PX9 1271 aa17.58■□□□□ 0.4
HERC2-208ENST00000566635 FAM107BQ9H098 131 aa17.58■□□□□ 0.4
HERC2-208ENST00000566635 RSPH9Q9H1X1 276 aaPredicted RBP17.58■□□□□ 0.4
HERC2-208ENST00000566635 ABCG8Q9H221 673 aa17.58■□□□□ 0.4
HERC2-208ENST00000566635 ANKRD6Q9Y2G4 727 aa17.58■□□□□ 0.4
HERC2-208ENST00000566635 TCP11X1B4DZS4 312 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 AREL1O15033 823 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 MID1O15344 667 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 SYNCRIPO60506 623 aaKnown RBP17.57■□□□□ 0.4
HERC2-208ENST00000566635 PLIN3O60664 434 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 KLF8O95600 359 aaPredicted RBP17.57■□□□□ 0.4
HERC2-208ENST00000566635 PROCP04070 461 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 GM2AP17900 193 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 COL9A1P20849 921 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 ACRV1P26436 265 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 P2RY2P41231 377 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 SATB1Q01826 763 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 GRSF1Q12849 480 aaKnown RBP eCLIP17.57■□□□□ 0.4
HERC2-208ENST00000566635 INSCQ1MX18 579 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 GPR153Q6NV75 609 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 AADATQ8N5Z0 425 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 TSPAN17Q96FV3 270 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 ZNF317Q96PQ6 595 aaPredicted RBP17.57■□□□□ 0.4
HERC2-208ENST00000566635 GPAMQ9HCL2 828 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 PRDM6Q9NQX0 595 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 MED16Q9Y2X0 877 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 COQ6Q9Y2Z9 468 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 ACOT9Q9Y305 439 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 NIPSNAP2O75323 286 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 DRD1P21728 446 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 CD72P21854 359 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 DRD3P35462 400 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 GLRBP48167 497 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 LIG3P49916 1009 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 CST6Q15828 149 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 PDK4Q16654 411 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 TMEM207Q6UWW9 146 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 KYAT3Q6YP21 454 aaKnown RBP17.57■□□□□ 0.4
HERC2-208ENST00000566635 LRRC34Q8IZ02 419 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 CCDC63Q8NA47 563 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 TXNDC5Q8NBS9 432 aaKnown RBP17.57■□□□□ 0.4
HERC2-208ENST00000566635 GABRG3Q99928 467 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 P2RY12Q9H244 342 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 FAM50BQ9Y247 325 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 VPS9D1Q9Y2B5 631 aa17.57■□□□□ 0.4
HERC2-208ENST00000566635 COL6A3P12111 3177 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 A0A087X1B8 175 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 GMNCA6NCL1 334 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 PFDN6O15212 129 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 RHOBTB1O94844 696 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 WISP3O95389 354 aaPredicted RBP17.56■□□□□ 0.4
HERC2-208ENST00000566635 GSTA1P08263 222 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 TAC1P20366 129 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 PTGER3P43115 390 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 COPAP53621 1224 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 PTPN5P54829 565 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 ACOX1Q15067 660 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 PIP5KL1Q5T9C9 394 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 CERS6Q6ZMG9 384 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 NXPE1Q8N323 547 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 ANKRD49Q8WVL7 239 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 NXNL1Q96CM4 212 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 CHMP6Q96FZ7 201 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 SPATA16Q9BXB7 569 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 HDAC8Q9BY41 377 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 SLC6A17Q9H1V8 727 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 CCDC68Q9H2F9 335 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 CAMSAP3Q9P1Y5 1249 aaPredicted RBP17.56■□□□□ 0.4
HERC2-208ENST00000566635 GALPQ9UBC7 116 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 SERGEFQ9UGK8 458 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 AGAP14A8MT82 685 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 VIMP08670 466 aaKnown RBP17.56■□□□□ 0.4
HERC2-208ENST00000566635 SRFP11831 508 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 PKMP14618 531 aaKnown RBP17.56■□□□□ 0.4
HERC2-208ENST00000566635 PFKPQ01813 784 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 TDGQ13569 410 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 CSHL1Q14406 222 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 GPR33Q49SQ1 333 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 SETMARQ53H47 684 aaPredicted RBP17.56■□□□□ 0.4
HERC2-208ENST00000566635 FAM46CQ5VWP2 391 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 ZDHHC20Q5W0Z9 365 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 TECPR1Q7Z6L1 1165 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 MKRN2Q9H000 416 aaKnown RBP17.56■□□□□ 0.4
HERC2-208ENST00000566635 IGSF5Q9NSI5 407 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 TMPRSS11EQ9UL52 423 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 RUVBL2Q9Y230 463 aaKnown RBP17.56■□□□□ 0.4
HERC2-208ENST00000566635 PRSS21Q9Y6M0 314 aa17.56■□□□□ 0.4
HERC2-208ENST00000566635 TK2O00142 265 aa17.55■□□□□ 0.4
HERC2-208ENST00000566635 HOXB2P14652 356 aa17.55■□□□□ 0.4
HERC2-208ENST00000566635 BGNP21810 368 aa17.55■□□□□ 0.4
HERC2-208ENST00000566635 SUOXP51687 545 aa17.55■□□□□ 0.4
Retrieved 100 of 20,778 RNA–protein pairs in 52.5 ms