RNA–Protein interactions for RNA: ENST00000563790.5

HDGFL3-204, Transcript of HDGF like 3, humanhuman

TSL 3

Gene HDGFL3, Length 934 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDGFL3-204ENST00000563790 TNNI1P19237 187 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 ITIH2P19823 946 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 MX2P20592 715 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 ACTR1BP42025 376 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 ACTR1AP61163 376 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 CACNG1Q06432 222 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 TMEM52BQ4KMG9 183 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 KRTCAP3Q53RY4 240 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 PRAMEF13Q5VWM6 474 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 ISLR2Q6UXK2 745 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 CBWD2Q8IUF1 395 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 NECAB1Q8N987 351 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 TMEM125Q96AQ2 219 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 VOPP1Q96AW1 172 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 TBC1D10AQ9BXI6 508 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 LDHAL6BQ9BYZ2 381 aaPredicted RBP10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 CEP44Q9C0F1 390 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 TTYH3Q9C0H2 523 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 STN1Q9H668 368 aaKnown RBP10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 CRIM1Q9NZV1 1036 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 CBLCQ9ULV8 474 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 TLR6Q9Y2C9 796 aa10.47□□□□□ -0.73
HDGFL3-204ENST00000563790 LILRA5A6NI73 299 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 KIAA0391O15091 583 aaKnown RBP10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 TGFB1I1O43294 461 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 BUB1BO60566 1050 aaPredicted RBP10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 TSPAN12O95859 305 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 LTFP02788 710 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 CEACAM5P06731 702 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 DLATP10515 647 aaKnown RBP10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 RORAP35398 523 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 ADCY8P40145 1251 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 GNPDA1P46926 289 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 PLA2G4EQ3MJ16 856 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 IRAK1BP1Q5VVH5 260 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 CEP128Q6ZU80 1094 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 PAQR7Q86WK9 346 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 GPBP1Q86WP2 473 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 TMEM126BQ8IUX1 230 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 MARVELD2Q8N4S9 558 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 RNF166Q96A37 237 aaPredicted RBP10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 ZNF514Q96K75 400 aaPredicted RBP10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 GPR137Q96N19 417 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 DHRS4Q9BTZ2 278 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 MLPHQ9BV36 600 aaPredicted RBP10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 SARGQ9BW04 601 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 MUC3BQ9H195 1237 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 YAE1D1Q9NRH1 226 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 SUFUQ9UMX1 484 aa10.46□□□□□ -0.73
HDGFL3-204ENST00000563790 COL7A1Q02388 2944 aa10.46□□□□□ -0.74
HDGFL3-204ENST00000563790 C3orf80F5H4A9 247 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 AGPSO00116 658 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 O00370 1275 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 LDB2O43679 373 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 CD5LO43866 347 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 DNAJC6O75061 913 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 TBCAO75347 108 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 UGT2B4P06133 528 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 PGRP06401 933 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 NID1P14543 1247 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 ABOP16442 354 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 GKP32189 559 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 ARG2P78540 354 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 ACY1Q03154 408 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 INCA1Q0VD86 236 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 DAZAP2Q15038 168 aaPredicted RBP10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 ZRSR1Q15695 479 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 CYP2A13Q16696 494 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 RABGAP1LQ5R372 815 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 L1TD1Q5T7N2 865 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 CACHD1Q5VU97 1274 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 KIAA0930Q6ICG6 404 aaPredicted RBP10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 LINC00696Q6ZRV3 163 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 PPP1R32Q7Z5V6 425 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 PLPP6Q8IY26 295 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 SIDT2Q8NBJ9 832 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 SLC41A2Q96JW4 573 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 KLHL32Q96NJ5 620 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 ACCSQ96QU6 501 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 PRMT1Q99873 361 aaKnown RBP10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 WDR26Q9H7D7 661 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 MTMR6Q9Y217 621 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 TBC1D30Q9Y2I9 924 aa10.45□□□□□ -0.74
HDGFL3-204ENST00000563790 PRRG2O14669 202 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 EML2O95834 649 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 TP53P04637 393 aaPredicted RBP10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 MYCLP1P12525 358 aaPredicted RBP10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 P4HA1P13674 534 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 ERCC5P28715 1186 aaPredicted RBP10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 CTSCP53634 463 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 FLYWCH1Q4VC44 716 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 SYTL1Q8IYJ3 562 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 LRRC17Q8N6Y2 441 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 DCAF4L2Q8NA75 395 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 CPT1BQ92523 772 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 ZNF516Q92618 1163 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 ELMO3Q96BJ8 720 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 BTN2A3PQ96KV6 586 aa10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 IPO9Q96P70 1041 aaKnown RBP10.44□□□□□ -0.74
HDGFL3-204ENST00000563790 MAP3K3Q99759 626 aa10.44□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms