RNA–Protein interactions for RNA: ENST00000563739.5

SF3B3-204, Transcript of splicing factor 3b subunit 3, humanhuman

TSL 2

Gene SF3B3, Length 1,105 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B3-204ENST00000563739 VWA3BQ502W6 1294 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 HSP90AA4PQ58FG1 418 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 CFAP58Q5T655 872 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 C6orf15Q6UXA7 325 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-204ENST00000563739 CLEC17AQ6ZS10 378 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 PHF13Q86YI8 300 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-204ENST00000563739 FAM114A1Q8IWE2 563 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 ADAMTS17Q8TE56 1095 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 C19orf60Q96EN9 201 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 C9orf72Q96LT7 481 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 RANBP9Q96S59 729 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 SLC38A3Q99624 504 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 MGME1Q9BQP7 344 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 SNRNP25Q9BV90 132 aaKnown RBP10.26□□□□□ -0.77
SF3B3-204ENST00000563739 CINPQ9BW66 212 aaPredicted RBP10.26□□□□□ -0.77
SF3B3-204ENST00000563739 STK33Q9BYT3 514 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 BRD8Q9H0E9 1235 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 PDCL3Q9H2J4 239 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 ACTL8Q9H568 366 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 CATSPERBQ9H7T0 1116 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 NOD2Q9HC29 1040 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 CASS4Q9NQ75 786 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 ETNK2Q9NVF9 386 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 KIAA1468Q9P260 1216 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 KCND3Q9UK17 655 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 KCNK6Q9Y257 313 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 PCM1Q15154 2024 aa10.26□□□□□ -0.77
SF3B3-204ENST00000563739 DIDO1Q9BTC0 2240 aaKnown RBP10.25□□□□□ -0.77
SF3B3-204ENST00000563739 SIGLEC16A6NMB1 481 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 FADS2P1A8MWK0 482 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 PGLSO95336 258 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 DDAH2O95865 285 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 FGF5P12034 268 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 CTPS1P17812 591 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 ERCC2P18074 760 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 MTIF2P46199 727 aaKnown RBP10.25□□□□□ -0.77
SF3B3-204ENST00000563739 TPI1P60174 286 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 PTSQ03393 145 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 IL10RBQ08334 325 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 DPYSQ14117 519 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 NFKBIBQ15653 356 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 CLEC16AQ2KHT3 1053 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 LRRC66Q68CR7 880 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 ZNF677Q86XU0 584 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 RBMXL3Q8N7X1 1067 aaKnown RBP10.25□□□□□ -0.77
SF3B3-204ENST00000563739 PDCD6IPQ8WUM4 868 aaKnown RBP10.25□□□□□ -0.77
SF3B3-204ENST00000563739 RSC1A1Q92681 617 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 SCRN2Q96FV2 425 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 MCEEQ96PE7 176 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 NUDCD1Q96RS6 583 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 TRIM7Q9C029 511 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 TWSG1Q9GZX9 223 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 DTLQ9NZJ0 730 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 AP4E1Q9UPM8 1137 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 PCDHGA9Q9Y5G4 932 aaKnown RBP10.25□□□□□ -0.77
SF3B3-204ENST00000563739 TACC2O95359 2948 aa10.25□□□□□ -0.77
SF3B3-204ENST00000563739 MTORP42345 2549 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 ARHGAP42A6NI28 874 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 INPP4BO15327 924 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 KRT86O43790 486 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 SPAG6O75602 509 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 NDUFA10O95299 355 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 RECKO95980 971 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 ATP1A1P05023 1023 aaKnown RBP10.24□□□□□ -0.77
SF3B3-204ENST00000563739 GRNP28799 593 aaKnown RBP10.24□□□□□ -0.77
SF3B3-204ENST00000563739 MAPK9P45984 424 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 GPR1P46091 355 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 STC1P52823 247 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 MAXP61244 160 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 UBE2HP62256 183 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 LRP8Q14114 963 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 RFTN1Q14699 578 aaPredicted RBP10.24□□□□□ -0.77
SF3B3-204ENST00000563739 LBRQ14739 615 aaKnown RBP10.24□□□□□ -0.77
SF3B3-204ENST00000563739 UGT8Q16880 541 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 TMCO4Q5TGY1 634 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 FAM69BQ5VUD6 431 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 SLC6A19Q695T7 634 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 JMJD6Q6NYC1 403 aaPredicted RBP10.24□□□□□ -0.77
SF3B3-204ENST00000563739 SCYL2Q6P3W7 929 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 FAM199XQ6PEV8 388 aaPredicted RBP10.24□□□□□ -0.77
SF3B3-204ENST00000563739 CERS6Q6ZMG9 384 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 RFX8Q6ZV50 586 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 ZNF765Q7L2R6 523 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 PRSS42Q7Z5A4 293 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 GALNT13Q8IUC8 556 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 MSANTD4Q8NCY6 345 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 KLHL6Q8WZ60 621 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 INPP5DQ92835 1189 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 AHCYL2Q96HN2 611 aaKnown RBP10.24□□□□□ -0.77
SF3B3-204ENST00000563739 ELMO2Q96JJ3 720 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 GBP4Q96PP9 640 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 PLEKHG4BQ96PX9 1271 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 OR6C1Q96RD1 312 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 TUBGCP2Q9BSJ2 902 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 CNPY3Q9BT09 278 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 SYT11Q9BT88 431 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 VPS16Q9H269 839 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 LHX9Q9NQ69 397 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 ADAM22Q9P0K1 906 aa10.24□□□□□ -0.77
SF3B3-204ENST00000563739 SEMA5BQ9P283 1151 aa10.24□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms