RNA–Protein interactions for RNA: ENST00000563219.1

SHCBP1-202, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 485 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-202ENST00000563219 LRIF1Q5T3J3 769 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 ADALQ6DHV7 355 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 KRTAP5-11Q6L8G4 156 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 GLDNQ6ZMI3 551 aaPredicted RBP3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 GALNTL5Q7Z4T8 443 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 PRPF39Q86UA1 669 aaKnown RBP3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 DNAAF5Q86Y56 855 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 TICAM1Q8IUC6 712 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 CLIP4Q8N3C7 705 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 TTC30BQ8N4P2 665 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 ZBTB2Q8N680 514 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 AVL9Q8NBF6 648 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 OR14A16Q8NHC5 309 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 FAM216AQ8WUB2 273 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 MRPS27Q92552 414 aaKnown RBP3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 ARHGEF26Q96DR7 871 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 PHF21BQ96EK2 531 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 LRFN5Q96NI6 719 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 ZNF570Q96NI8 536 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 SLC25A33Q9BSK2 321 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 FAM129AQ9BZQ8 928 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 HRH4Q9H3N8 390 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 GRPEL1Q9HAV7 217 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 ARHGEF38Q9NXL2 777 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 WDR35Q9P2L0 1181 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 WNT16Q9UBV4 365 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 PADI1Q9ULC6 663 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 PPIEQ9UNP9 301 aaKnown RBP3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 PAM16Q9Y3D7 125 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 CEPT1Q9Y6K0 416 aa3.28□□□□□ -1.88
SHCBP1-202ENST00000563219 A0A0U1RQJ8 604 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 CPED1A4D0V7 1026 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 OR2A25A4D2G3 310 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 BCL10O95999 233 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 SRPRAP08240 638 aaKnown RBP3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 ZNF182P17025 639 aaPredicted RBP3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 CPT2P23786 658 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 RPL3P39023 403 aaKnown RBP3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 SUOXP51687 545 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 STAT2P52630 851 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 TMF1P82094 1093 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 ROR1Q01973 937 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 NAE1Q13564 534 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 TNFAIP1Q13829 316 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 PCLAFQ15004 111 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 DLG2Q15700 870 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 EFNB3Q15768 340 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 ASIC2Q16515 512 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 MMEL1Q495T6 779 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 CDONQ4KMG0 1287 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 SOWAHCQ53LP3 525 aaPredicted RBP3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 ERMARDQ5T6L9 678 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 FAM69BQ5VUD6 431 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 GARNL3Q5VVW2 1013 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 KRTAP5-6Q6L8G9 129 aaPredicted RBP3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 METTL2BQ6P1Q9 378 aaKnown RBP3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 ANKRD23Q86SG2 305 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 FBXL14Q8N1E6 418 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 IQCF1Q8N6M8 205 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 RBMXL3Q8N7X1 1067 aaKnown RBP3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 POGLUT1Q8NBL1 392 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 PRPF31Q8WWY3 499 aaKnown RBP3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 PGAP3Q96FM1 320 aaPredicted RBP3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 METTL2AQ96IZ6 378 aaKnown RBP3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 TXNDC15Q96J42 360 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 PPP1R13BQ96KQ4 1090 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 CTAGE1Q96RT6 745 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 TMEM47Q9BQJ4 181 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 ZPBPQ9BS86 351 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 NTPCRQ9BSD7 190 aaKnown RBP3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 TEX12Q9BXU0 123 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 RABEP2Q9H5N1 569 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 PAG1Q9NWQ8 432 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 C5AR2Q9P296 337 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 ERVK-11Q9UQG0 969 aa3.27□□□□□ -1.89
SHCBP1-202ENST00000563219 EVPLQ92817 2033 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 A6NL46 340 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 VCYO14598 125 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 ATP2A1O14983 1001 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 SCAMP1O15126 338 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 ADAMDEC1O15204 470 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 KCNJ13O60928 360 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 TADA2AO75478 443 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 SERPINI2O75830 405 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 GAGE7O76087 117 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 ZWINTO95229 277 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 FTCDO95954 541 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 CH25HO95992 272 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 ABCB1P08183 1280 aaPredicted RBP3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 GAGE12FP0CL80 117 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 GAGE12GP0CL81 117 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 GAGE12IP0CL82 117 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 MMP9P14780 707 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 TMEM11P17152 192 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 PON1P27169 355 aa3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 C21orf33P30042 268 aaPredicted RBP3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 HOXA11P31270 313 aaPredicted RBP3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 MATR3P43243 847 aaKnown RBP eCLIP3.26□□□□□ -1.89
SHCBP1-202ENST00000563219 PCYT1AP49585 367 aa3.26□□□□□ -1.89
Retrieved 100 of 20,778 RNA–protein pairs in 47 ms