RNA–Protein interactions for RNA: ENST00000563218.5

SPG7-207, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 5

Gene SPG7, Length 654 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-207ENST00000563218 MAPK10P53779 464 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 MRPS25P82663 173 aaKnown RBP13.35□□□□□ -0.27
SPG7-207ENST00000563218 SLC7A5Q01650 507 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 MTM1Q13496 603 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 CERCAMQ5T4B2 595 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 TTC27Q6P3X3 843 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 LVRNQ6Q4G3 990 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 SPRED1Q7Z699 444 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 SLITRK4Q8IW52 837 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 UMODL1-AS1Q8N2C9 162 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 TSEN2Q8NCE0 465 aaKnown RBP13.35□□□□□ -0.27
SPG7-207ENST00000563218 HTR3CQ8WXA8 447 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 SCG3Q8WXD2 468 aaKnown RBP13.35□□□□□ -0.27
SPG7-207ENST00000563218 PMEPA1Q969W9 287 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 HAUS1Q96CS2 278 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 SGF29Q96ES7 293 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 STRADBQ9C0K7 418 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 RAB17Q9H0T7 212 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 TMEM168Q9H0V1 697 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 SEMA6CQ9H3T2 930 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 SUDS3Q9H7L9 328 aaPredicted RBP13.35□□□□□ -0.27
SPG7-207ENST00000563218 ARGLU1Q9NWB6 273 aaPredicted RBP13.35□□□□□ -0.27
SPG7-207ENST00000563218 CWC15Q9P013 229 aaKnown RBP13.35□□□□□ -0.27
SPG7-207ENST00000563218 ATP8A1Q9Y2Q0 1164 aa13.35□□□□□ -0.27
SPG7-207ENST00000563218 TTC24A2A3L6 582 aaPredicted RBP13.34□□□□□ -0.27
SPG7-207ENST00000563218 LIASO43766 372 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 PRAMEF11O60813 436 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 RECQL5O94762 991 aaPredicted RBP13.34□□□□□ -0.27
SPG7-207ENST00000563218 ECEL1O95672 775 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 FAM87AP0C7U9 286 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 LIPCP11150 499 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 ITGB6P18564 788 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 HTR1BP28222 390 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 PTGIRP43119 386 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 KCNJ1P48048 391 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 MAZP56270 477 aaKnown RBP13.34□□□□□ -0.27
SPG7-207ENST00000563218 YBEYP58557 167 aaPredicted RBP13.34□□□□□ -0.27
SPG7-207ENST00000563218 KIAA1024LP59773 190 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 TPI1P60174 286 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 OTUD4Q01804 1114 aaKnown RBP13.34□□□□□ -0.27
SPG7-207ENST00000563218 ZFP36L1Q07352 338 aaKnown RBP13.34□□□□□ -0.27
SPG7-207ENST00000563218 EIF3IQ13347 325 aaKnown RBP13.34□□□□□ -0.27
SPG7-207ENST00000563218 HLTFQ14527 1009 aaKnown RBP eCLIP13.34□□□□□ -0.27
SPG7-207ENST00000563218 C16orf72Q14CZ0 275 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 AGERQ15109 404 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 PARP15Q460N3 678 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 SLC9A4Q6AI14 798 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 WDR93Q6P2C0 686 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 DRICH1Q6PGQ1 229 aaPredicted RBP13.34□□□□□ -0.27
SPG7-207ENST00000563218 SYDE1Q6ZW31 735 aaPredicted RBP13.34□□□□□ -0.27
SPG7-207ENST00000563218 USP53Q70EK8 1073 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 TAF8Q7Z7C8 310 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 TP53INP2Q8IXH6 220 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 IFT20Q8IY31 132 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 PQLC3Q8N755 202 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 FAM46DQ8NEK8 389 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 OR56A4Q8NGH8 313 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 ATL2Q8NHH9 583 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 ACTL9Q8TC94 416 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 PTCD2Q8WV60 388 aaKnown RBP13.34□□□□□ -0.27
SPG7-207ENST00000563218 P3H4Q92791 437 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 USP7Q93009 1102 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 FAM118BQ9BPY3 351 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 SLC39A8Q9C0K1 460 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 DMGDHQ9UI17 866 aaKnown RBP13.34□□□□□ -0.27
SPG7-207ENST00000563218 ACSL6Q9UKU0 697 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 UTP11Q9Y3A2 253 aaKnown RBP13.34□□□□□ -0.27
SPG7-207ENST00000563218 PCDHGA4Q9Y5G9 962 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 DGKBQ9Y6T7 804 aa13.34□□□□□ -0.27
SPG7-207ENST00000563218 GAS8O95995 478 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 AMPD1P23109 780 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 HTR7P34969 479 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 HCAR3P49019 387 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 PAPOLAP51003 745 aaKnown RBP13.33□□□□□ -0.28
SPG7-207ENST00000563218 ARSDP51689 593 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 EIF3EP60228 445 aaKnown RBP13.33□□□□□ -0.28
SPG7-207ENST00000563218 GUCY2DQ02846 1103 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 PPP1R7Q15435 360 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 C14orf28Q4W4Y0 310 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 CFAP58Q5T655 872 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 PHF19Q5T6S3 580 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 ERAP2Q6P179 960 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 OGFOD3Q6PK18 319 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 NPNTQ6UXI9 565 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 LIPIQ6XZB0 460 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 RFX8Q6ZV50 586 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 GSTA5Q7RTV2 222 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 SRLQ86TD4 932 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 ARHGAP12Q8IWW6 846 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 NPWQ8N729 165 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 PLD5Q8N7P1 536 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 HCAR2Q8TDS4 363 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 PATE1Q8WXA2 126 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 JPH3Q8WXH2 748 aaPredicted RBP13.33□□□□□ -0.28
SPG7-207ENST00000563218 SLCO2A1Q92959 643 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 TMEM74Q96NL1 305 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 CATSPERBQ9H7T0 1116 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 RDH14Q9HBH5 336 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 CYP4F12Q9HCS2 524 aa13.33□□□□□ -0.28
SPG7-207ENST00000563218 LRIT1Q9P2V4 623 aa13.33□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 23.1 ms