RNA–Protein interactions for RNA: ENST00000560834.1

CTDSPL2-210, Transcript of CTD small phosphatase like 2, humanhuman

TSL 4

Gene CTDSPL2, Length 571 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTDSPL2-210ENST00000560834 EBNA1BP2Q99848 306 aaKnown RBP7□□□□□ -1.29
CTDSPL2-210ENST00000560834 MYOCQ99972 504 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 SLC17A9Q9BYT1 436 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 FOXP3Q9BZS1 431 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 SAYSD1Q9NPB0 183 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 MBNL1Q9NR56 388 aaKnown RBP7□□□□□ -1.29
CTDSPL2-210ENST00000560834 GPR27Q9NS67 375 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 CDV3Q9UKY7 258 aaKnown RBP7□□□□□ -1.29
CTDSPL2-210ENST00000560834 TMPRSS11EQ9UL52 423 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 NFU1Q9UMS0 254 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 DMTF1Q9Y222 760 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 CA5BQ9Y2D0 317 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 PKP3Q9Y446 797 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 R4GN57 208 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 TMEM131Q92545 1883 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 SPAG17Q6Q759 2223 aa7□□□□□ -1.29
CTDSPL2-210ENST00000560834 GLYATL1P3A0A0U1RQE8 302 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 CCDC162PA2VCL2 907 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 OR51F1A6NGY5 319 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 AGAP14A8MT82 685 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 H0Y8X5 98 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 STX7O15400 261 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 SLC31A1O15431 190 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 CTIFO43310 598 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 PRAMEF1O95521 474 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 PAK4O96013 591 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 GOT2P00505 430 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 C1QAP02745 245 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 FAM153BP0C7A2 387 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 PRSS56P0CW18 603 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 CD27P26842 260 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 TEAD1P28347 426 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 MC4RP32245 332 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 FOXN2P32314 431 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 NUDT1P36639 197 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 HADHAP40939 763 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 ARCN1P48444 511 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 CLDN2P57739 230 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 GPX6P59796 221 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 SH3BP2P78314 561 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 LAMB3Q13751 1172 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 SEMA3AQ14563 771 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 LRRC14Q15048 493 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 SMAD1Q15797 465 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 FAM153CQ494X1 144 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 ANKRD20A4Q4UJ75 823 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 SPDYCQ5MJ68 293 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 HP1BP3Q5SSJ5 553 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 LYSMD4Q5XG99 296 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 CASC4Q6P4E1 433 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 AFTPHQ6ULP2 937 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 FAM151BQ6UXP7 276 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 UNC5AQ6ZN44 842 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 NLRP9Q7RTR0 991 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 ABI3BPQ7Z7G0 1075 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 CCDC25Q86WR0 208 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 RELL1Q8IUW5 271 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 ZBED8Q8IZ13 594 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 UNC5BQ8IZJ1 945 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 TRAM1L1Q8N609 369 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 DTX3LQ8TDB6 740 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 DNASE2BQ8WZ79 361 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 UBXN4Q92575 508 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 AP2M1Q96CW1 435 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 CDKN2AIPNLQ96HQ2 116 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 BMFQ96LC9 184 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 C9orf72Q96LT7 481 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 TBATAQ96M53 351 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 PRRX2Q99811 253 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 NAT9Q9BTE0 207 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 RIOK2Q9BVS4 552 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 C1QTNF7Q9BXJ2 289 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 TXLNGYQ9BZA5 131 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 CDC42EP4Q9H3Q1 356 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 TM9SF3Q9HD45 589 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 IL26Q9NPH9 171 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 RAD18Q9NS91 495 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 SMOXQ9NWM0 555 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 KCTD5Q9NXV2 234 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 NINJ2Q9NZG7 142 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 IL1RAPL1Q9NZN1 696 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 SAMD15Q9P1V8 674 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 MARCH4Q9P2E8 410 aaPredicted RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 MTRF1LQ9UGC7 380 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 EIF2B4Q9UI10 523 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 RAB21Q9UL25 225 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 FNDC3AQ9Y2H6 1198 aaKnown RBP6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 MAD1L1Q9Y6D9 718 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 RPS6KL1Q9Y6S9 549 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 FRYLO94915 3013 aa6.99□□□□□ -1.29
CTDSPL2-210ENST00000560834 ABCA7Q8IZY2 2146 aa6.98□□□□□ -1.29
CTDSPL2-210ENST00000560834 TRBV5-4A0A0C4DH59 114 aa6.98□□□□□ -1.29
CTDSPL2-210ENST00000560834 A0A1W2PR77 199 aa6.98□□□□□ -1.29
CTDSPL2-210ENST00000560834 POM121BA6NF01 834 aa6.98□□□□□ -1.29
CTDSPL2-210ENST00000560834 A6NNZ2 444 aa6.98□□□□□ -1.29
CTDSPL2-210ENST00000560834 PRAMEF26H0Y7S4 382 aa6.98□□□□□ -1.29
CTDSPL2-210ENST00000560834 SRP72O76094 671 aaKnown RBP6.98□□□□□ -1.29
CTDSPL2-210ENST00000560834 EPN2O95208 641 aa6.98□□□□□ -1.29
CTDSPL2-210ENST00000560834 WNT1P04628 370 aa6.98□□□□□ -1.29
CTDSPL2-210ENST00000560834 TSHRP16473 764 aa6.98□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms