RNA–Protein interactions for RNA: ENST00000559694.5

CARMIL3-202, Transcript of capping protein regulator and myosin 1 linker 3, humanhuman

TSL 5

Gene CARMIL3, Length 4,319 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CARMIL3-202ENST00000559694 DOCK1Q14185 1865 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 KPNA5O15131 536 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 PCCBP05166 539 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 GRK2P25098 689 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 NAGLUP54802 743 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 MRPS22P82650 360 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 TRIM71Q2Q1W2 868 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 PM20D1Q6GTS8 502 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 CMC1Q7Z7K0 106 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 PCDH20Q8N6Y1 951 aaKnown RBP10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 KYQ8NBH2 561 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 METTL6Q8TCB7 284 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 BRSK1Q8TDC3 778 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 P2RY13Q9BPV8 354 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 ZDHHC18Q9NUE0 388 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 FKBPLQ9UIM3 349 aa10.62□□□□□ -0.71
CARMIL3-202ENST00000559694 SYNDIG1LA6NDD5 238 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 C2orf71A6NGG8 1288 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 OR2AG2A6NM03 316 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 PEX1O43933 1283 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 LTA4HP09960 611 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 DDX5P17844 614 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 GRIA1P42261 906 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 C21orf59P57076 290 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 BST1Q10588 318 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 PAFAH1B3Q15102 231 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 DHCR24Q15392 516 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 ZDHHC24Q6UX98 284 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 ARHGAP36Q6ZRI8 547 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 TDHQ8IZJ6 230 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 CFHR5Q9BXR6 569 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 TMEM248Q9NWD8 314 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 SLCO3A1Q9UIG8 710 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 PACSIN3Q9UKS6 424 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 LCHNA4D1U4 455 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 PEX11AO75192 247 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 KRT75O95678 551 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 ANXA5P08758 320 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 IRS1P35568 1242 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 SLC1A6P48664 564 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 RUNX3Q13761 415 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 DMC1Q14565 340 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 SPRED3Q2MJR0 410 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 PIK3R6Q5UE93 754 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 LYPLAL1Q5VWZ2 237 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 PACS1Q6VY07 963 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 RAVER1Q8IY67 606 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 CLEC4FQ8N1N0 589 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 KCTD4Q8WVF5 259 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 FGF13Q92913 245 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 DGCR14Q96DF8 476 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 IMP3Q9NV31 184 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 FBXL12Q9NXK8 326 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 GULP1Q9UBP9 304 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 CD207Q9UJ71 328 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 PNMA8BQ9ULN7 279 aaPredicted RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 TCAF1Q9Y4C2 921 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 TRPC5OSA6NMA1 111 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 FAM189A1O60320 539 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 PIGNO95427 931 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 KRT6AP02538 564 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 KRT6BP04259 564 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 ALPIP09923 528 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 PKMP14618 531 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 NMBRP28336 390 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 FOXN2P32314 431 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 KRT6CP48668 564 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 STK19P49842 368 aaPredicted RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 ABCE1P61221 599 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 GALNT2Q10471 571 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 CCDC153Q494R4 210 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 XKR4Q5GH76 650 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 SLC9A4Q6AI14 798 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 CCSAPQ6IQ19 270 aaPredicted RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 EFCAB3Q8N7B9 438 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 LINC01599Q8WXQ3 324 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 SORCS1Q8WY21 1168 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 RMND5BQ96G75 393 aaPredicted RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 CLPTM1LQ96KA5 538 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 FEM1AQ9BSK4 669 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 CADM1Q9BY67 442 aaKnown RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 NMUR2Q9GZQ4 415 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 KLHL25Q9H0H3 589 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 CAB39LQ9H9S4 337 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 SLC17A7Q9P2U7 560 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 OPTCQ9UBM4 332 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 NIPSNAP3AQ9UFN0 247 aaPredicted RBP10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 CDH7Q9ULB5 785 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 TMCO1Q9UM00 188 aa10.61□□□□□ -0.71
CARMIL3-202ENST00000559694 GNG14A0A1W2PPG7 69 aa10.6□□□□□ -0.71
CARMIL3-202ENST00000559694 M0R3G1 203 aa10.6□□□□□ -0.71
CARMIL3-202ENST00000559694 GKP32189 559 aa10.6□□□□□ -0.71
CARMIL3-202ENST00000559694 PTGIRP43119 386 aa10.6□□□□□ -0.71
CARMIL3-202ENST00000559694 SERPINB10P48595 397 aa10.6□□□□□ -0.71
CARMIL3-202ENST00000559694 RAB10P61026 200 aa10.6□□□□□ -0.71
CARMIL3-202ENST00000559694 LMAN2Q12907 356 aa10.6□□□□□ -0.71
CARMIL3-202ENST00000559694 USP4Q13107 963 aa10.6□□□□□ -0.71
CARMIL3-202ENST00000559694 STX5Q13190 355 aa10.6□□□□□ -0.71
CARMIL3-202ENST00000559694 SERINC3Q13530 473 aa10.6□□□□□ -0.71
CARMIL3-202ENST00000559694 NR6A1Q15406 480 aa10.6□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms