RNA–Protein interactions for RNA: ENST00000558958.1

CLPX-203, Transcript of caseinolytic mitochondrial matrix peptidase chaperone subunit, humanhuman

TSL 1 (best)

Gene CLPX, Length 1,493 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLPX-203ENST00000558958 SLC17A9Q9BYT1 436 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 EURLQ9NYK6 297 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 ZNF180Q9UJW8 692 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 IKBKGQ9Y6K9 419 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 TRPM6Q9BX84 2022 aa17.97■□□□□ 0.47
CLPX-203ENST00000558958 PLXNA2O75051 1894 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 IGHV1OR15-9A0A0B4J2B8 117 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 TLDC2A0PJX2 215 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 SMIM23A6NLE4 172 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 CDH16O75309 829 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 S1PR4O95977 384 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 AHSGP02765 367 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 F7P08709 466 aaPredicted RBP17.96■□□□□ 0.47
CLPX-203ENST00000558958 GP5P40197 560 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 LEPRP48357 1165 aaKnown RBP17.96■□□□□ 0.47
CLPX-203ENST00000558958 SGCGQ13326 291 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 KRT71Q3SY84 523 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 AARS2Q5JTZ9 985 aaKnown RBP17.96■□□□□ 0.47
CLPX-203ENST00000558958 CERS6Q6ZMG9 384 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 TAS2R42Q7RTR8 314 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 RLN3Q8WXF3 142 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 ASB12Q8WXK4 309 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 TBRG4Q969Z0 631 aaKnown RBP eCLIP17.96■□□□□ 0.47
CLPX-203ENST00000558958 ZBTB9Q96C00 473 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 PRMT8Q9NR22 394 aaPredicted RBP17.96■□□□□ 0.47
CLPX-203ENST00000558958 SMOXQ9NWM0 555 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 TXNDC16Q9P2K2 825 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 PSMC3IPQ9P2W1 217 aaPredicted RBP17.96■□□□□ 0.47
CLPX-203ENST00000558958 TMPRSS11EQ9UL52 423 aa17.96■□□□□ 0.47
CLPX-203ENST00000558958 FADS2P1A8MWK0 482 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 AXIN1O15169 862 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 PAK4O96013 591 aaPredicted RBP17.95■□□□□ 0.46
CLPX-203ENST00000558958 PMLP29590 882 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 TTPAP49638 278 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 CSE1LP55060 971 aaKnown RBP17.95■□□□□ 0.46
CLPX-203ENST00000558958 WSCD2Q2TBF2 565 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 SETMARQ53H47 684 aaPredicted RBP17.95■□□□□ 0.46
CLPX-203ENST00000558958 ZNF789Q5FWF6 425 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 GRTP1Q5TC63 336 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 CROCCP2Q86T23 111 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 SERPINA9Q86WD7 417 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 PELI3Q8N2H9 469 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 NXPE1Q8N323 547 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 RIBC1Q8N443 379 aaPredicted RBP17.95■□□□□ 0.46
CLPX-203ENST00000558958 FAM160A2Q8N612 972 aaPredicted RBP17.95■□□□□ 0.46
CLPX-203ENST00000558958 FRMD1Q8N878 549 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 TMEM105Q8N8V8 129 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 KLK6Q92876 244 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 ULK4Q96C45 1275 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 ACBD3Q9H3P7 528 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 FBXO6Q9NRD1 293 aaPredicted RBP17.95■□□□□ 0.46
CLPX-203ENST00000558958 CTNNAL1Q9UBT7 734 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 CRLS1Q9UJA2 301 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 K7ESM1 405 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 HAUS5O94927 633 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 SOD1P00441 154 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 ACRV1P26436 265 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 MAT2AP31153 395 aaKnown RBP17.95■□□□□ 0.46
CLPX-203ENST00000558958 LRRC14Q15048 493 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 DBN1Q16643 649 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 RNF187Q5TA31 235 aaPredicted RBP17.95■□□□□ 0.46
CLPX-203ENST00000558958 LYPLAL1Q5VWZ2 237 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 BMP8AQ7Z5Y6 402 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 ZC3HC1Q86WB0 502 aaKnown RBP17.95■□□□□ 0.46
CLPX-203ENST00000558958 TP53I13Q8NBR0 393 aaPredicted RBP17.95■□□□□ 0.46
CLPX-203ENST00000558958 VPS35Q96QK1 796 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 RBBP8Q99708 897 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 GPR174Q9BXC1 333 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 C1QTNF7Q9BXJ2 289 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 C6orf106Q9H6K1 298 aaPredicted RBP17.95■□□□□ 0.46
CLPX-203ENST00000558958 INTS10Q9NVR2 710 aaKnown RBP17.95■□□□□ 0.46
CLPX-203ENST00000558958 LGALS13Q9UHV8 139 aa17.95■□□□□ 0.46
CLPX-203ENST00000558958 CACNA1IQ9P0X4 2223 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 ZDBF2Q9HCK1 2354 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 CCDC163A0A0D9SF12 145 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 PFDN6O15212 129 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 LAMTOR5O43504 91 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 LATO43561 262 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 NDUFS3O75489 264 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 TDGF1P13385 188 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 SPRP35270 261 aaPredicted RBP17.94■□□□□ 0.46
CLPX-203ENST00000558958 PPARGP37231 505 aaPredicted RBP17.94■□□□□ 0.46
CLPX-203ENST00000558958 GPR1P46091 355 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 CD151P48509 253 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 SERPINB9P50453 376 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 CCR5P51681 352 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 DMWDQ09019 674 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 KIAA0895LQ68EN5 471 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 RAET1GQ6H3X3 334 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 CNSTQ6PJW8 725 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 C1orf210Q8IVY1 113 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 PLA2G15Q8NCC3 412 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 BTN2A2Q8WVV5 523 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 CENPTQ96BT3 561 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 KLF6Q99612 283 aaPredicted RBP17.94■□□□□ 0.46
CLPX-203ENST00000558958 TTC1Q99614 292 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 SH3GL2Q99962 352 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 RHOJQ9H4E5 214 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 TBK1Q9UHD2 729 aa17.94■□□□□ 0.46
CLPX-203ENST00000558958 VPS9D1Q9Y2B5 631 aa17.94■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 1874.6 ms