RNA–Protein interactions for RNA: ENST00000557538.5

HIF1A-212, Transcript of hypoxia inducible factor 1 subunit alpha, humanhuman

TSL 1 (best) BASIC

Gene HIF1A, Length 3,468 nt, Biotype protein coding, Subcellular localisation Cytosol, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HIF1A-212ENST00000557538 C16orf87Q6PH81 154 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 PAPD4Q6PIY7 484 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 TAOK1Q7L7X3 1001 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ZCCHC9Q8N567 271 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 LRRC57Q8N9N7 239 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 LILRB1Q8NHL6 650 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 BBS10Q8TAM1 723 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ATL1Q8WXF7 558 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 CENPTQ96BT3 561 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 NLRP4Q96MN2 994 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF385AQ96PM9 386 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 TXLNGYQ9BZA5 131 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 MMP27Q9H306 513 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 SH2D4AQ9H788 454 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 HIF1ANQ9NWT6 349 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 PLEKHB1Q9UF11 243 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 OSGIN1Q9UJX0 560 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 PADI1Q9ULC6 663 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 N6AMT1Q9Y5N5 214 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 KAT6AQ92794 2004 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 RPS10-NUDT3A0A1W2PQS6 291 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 OR6C75A6NL08 312 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 FAM90A26D6RGX4 464 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 UBE2CO00762 179 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 HS6ST1O60243 411 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 CCDC159P0C7I6 412 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ARHGAP25P42331 645 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 PIK3CAP42336 1068 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 RFX5P48382 616 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ARSEP51690 589 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 HNRNPH2P55795 449 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ILF3Q12906 894 aaKnown RBP eCLIP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 VEPH1Q14D04 833 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 FSCBQ5H9T9 825 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 SPECC1Q5M775 1068 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 SIGIRRQ6IA17 410 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 KCTD18Q6PI47 426 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 PACS1Q6VY07 963 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 NOXA1Q86UR1 476 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 GLCCI1Q86VQ1 547 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 MB21D2Q8IYB1 491 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 NDUFAF2Q8N183 169 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 TEX9Q8N6V9 391 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 NANOGP1Q8N7R0 232 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 NRACQ8N912 160 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 NEXN-AS1Q8NBZ9 246 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ZNF548Q8NEK5 533 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ARRDC2Q8TBH0 407 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 DUSP19Q8WTR2 217 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ATOH1Q92858 354 aaPredicted RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 CCDC47Q96A33 483 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 BBS4Q96RK4 519 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 SDF4Q9BRK5 362 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 HEMGNQ9BXL5 484 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 SMARCAD1Q9H4L7 1026 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 SLC32A1Q9H598 525 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 BPIFA1Q9NP55 256 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 PCDHB16Q9NRJ7 776 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 TRNAU1APQ9NX07 287 aaKnown RBP1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ELOVL5Q9NYP7 299 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 SMARCAL1Q9NZC9 954 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 OR6C3Q9NZP0 311 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 CMAHPQ9Y471 501 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 ATP6V0A2Q9Y487 856 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 CLIC4Q9Y696 253 aa1.72□□□□□ -2.13
HIF1A-212ENST00000557538 A0A1W2PRQ8 180 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 J3KR12 359 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 ATP2A1O14983 1001 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 ADAMDEC1O15204 470 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 BUD23O43709 281 aaKnown RBP1.71□□□□□ -2.14
HIF1A-212ENST00000557538 SLC25A17O43808 307 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 HMMRO75330 724 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 SIX3O95343 332 aaPredicted RBP1.71□□□□□ -2.14
HIF1A-212ENST00000557538 RB1P06400 928 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 DANCRP0C864 163 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 GZMAP12544 262 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 THPOP40225 353 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 APOBEC1P41238 236 aaKnown RBP1.71□□□□□ -2.14
HIF1A-212ENST00000557538 MXI1P50539 228 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 P2RX3P56373 397 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 IFI35P80217 286 aaPredicted RBP1.71□□□□□ -2.14
HIF1A-212ENST00000557538 CEBPZQ03701 1054 aaKnown RBP1.71□□□□□ -2.14
HIF1A-212ENST00000557538 CRYZQ08257 329 aaKnown RBP1.71□□□□□ -2.14
HIF1A-212ENST00000557538 NAE1Q13564 534 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 NFATC4Q14934 902 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 PPP2R5BQ15173 497 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 ZSCAN26Q16670 478 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 MYLK3Q32MK0 819 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 TMEM119Q4V9L6 283 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 CCDC92Q53HC0 331 aaPredicted RBP1.71□□□□□ -2.14
HIF1A-212ENST00000557538 FAM133BQ5BKY9 247 aaKnown RBP1.71□□□□□ -2.14
HIF1A-212ENST00000557538 TCP11X2Q5H9J9 407 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 FNBP1LQ5T0N5 605 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 SLC2A7Q6PXP3 512 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 TSSK4Q6SA08 328 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 CCDC73Q6ZRK6 1079 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 RBM23Q86U06 439 aaKnown RBP1.71□□□□□ -2.14
HIF1A-212ENST00000557538 ARID3BQ8IVW6 561 aaPredicted RBP1.71□□□□□ -2.14
HIF1A-212ENST00000557538 OR8H2Q8N162 312 aa1.71□□□□□ -2.14
HIF1A-212ENST00000557538 GUF1Q8N442 669 aaKnown RBP1.71□□□□□ -2.14
Retrieved 100 of 20,778 RNA–protein pairs in 34.9 ms