RNA–Protein interactions for RNA: ENST00000557275.5

SYNE3-205, Transcript of spectrin repeat containing nuclear envelope family member 3, humanhuman

APPRIS ALT1 TSL 2 BASIC

Gene SYNE3, Length 13,488 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SYNE3-205ENST00000557275 CARNMT1Q8N4J0 409 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 TCTEX1D2Q8WW35 142 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 IFT52Q9Y366 437 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 PCDHA11Q9Y5I1 949 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 SUPT20HL2P0C7V6 817 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 OR1G1P47890 313 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 TRAM1Q15629 374 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 C3P1Q6ZMU1 363 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 HID1Q8IV36 788 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 MB21D2Q8IYB1 491 aaPredicted RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 AP2M1Q96CW1 435 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 PCBD2Q9H0N5 130 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 RBM22Q9NW64 420 aaKnown RBP eCLIP8.8□□□□□ -1
SYNE3-205ENST00000557275 CTSEP14091 401 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 TAS2R43P59537 309 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 DCDC1P59894 354 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 LAPTM5Q13571 262 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 PGM2L1Q6PCE3 622 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 NATD1Q8N6N6 113 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 FBXO25Q8TCJ0 367 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 DHX33Q9H6R0 707 aaKnown RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 ATP13A3Q9H7F0 1226 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 RAVER2Q9HCJ3 691 aaKnown RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 COPZ2Q9P299 210 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 HECW2Q9P2P5 1572 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 FAM46CQ5VWP2 391 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 RAD51AP1Q96B01 352 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 KCTD7Q96MP8 289 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 TBC1D10AQ9BXI6 508 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 EDARQ9UNE0 448 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 ARHGEF5Q12774 1597 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 METTL21CQ5VZV1 264 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 CHST4Q8NCG5 386 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 TIFAQ96CG3 184 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 PMF1-BGLAPU3KQ54 211 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 EFCAB6Q5THR3 1501 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 NOTOA8MTQ0 251 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 PER2O15055 1255 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 AGR2O95994 175 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 DYNLL1P63167 89 aaKnown RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 E2F1Q01094 437 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 MERTKQ12866 999 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 SPOCD1Q6ZMY3 1216 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 KANSL1Q7Z3B3 1105 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 FAM47BQ8NA70 645 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 YTHDF1Q9BYJ9 559 aaKnown RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 CDHR5Q9HBB8 845 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 RAB21Q9UL25 225 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 ARPC2O15144 300 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 SLC2A2P11168 524 aaPredicted RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 LAMP2P13473 410 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 CHMP24386 653 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 PBLDP30039 288 aaPredicted RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 MCAMP43121 646 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 ZNF844Q08AG5 666 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 TERB2Q8NHR7 220 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 SCGB1C1Q8TD33 95 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 SLC38A4Q969I6 547 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 SLC7A6OSQ96CW6 309 aaPredicted RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 GPATCH1Q9BRR8 931 aaKnown RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 CABIN1Q9Y6J0 2220 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 TRIM64BA6NI03 449 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 ADAMTS3O15072 1205 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 HCN1O60741 890 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 MT-CO2P00403 227 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 ZNF517Q6ZMY9 492 aaPredicted RBP8.8□□□□□ -1
SYNE3-205ENST00000557275 NUP54Q7Z3B4 507 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 BBS1Q8NFJ9 593 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 ITFG2Q969R8 447 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 ADAM33Q9BZ11 813 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 RGCCQ9H4X1 137 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 KCTD5Q9NXV2 234 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 ZMYM5Q9UJ78 669 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 PNPLA6Q8IY17 1366 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 HEG1Q9ULI3 1381 aa8.8□□□□□ -1
SYNE3-205ENST00000557275 B3GAT3O94766 335 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 CSF1RP07333 972 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 KELP23276 732 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 RAB10P61026 200 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 DCST1Q5T197 706 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 TMEM110Q86TL2 294 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 NR4A3Q92570 626 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 ART5Q96L15 291 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 THAP2Q9H0W7 228 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 SH3PXD2BA1X283 911 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 TNFRSF10BO14763 440 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 GCNT1Q02742 428 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 EGFLAMQ63HQ2 1017 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 C3orf33Q6P1S2 294 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 KLQ9UEF7 1012 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 ITGB3P05106 788 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 FABP3P05413 133 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 GRK1Q15835 563 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 NDUFA9Q16795 377 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 ARSKQ6UWY0 536 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 PPCDCQ96CD2 204 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 LPIN3Q9BQK8 851 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 C1orf109Q9NX04 203 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 PADI2Q9Y2J8 665 aa8.79□□□□□ -1
SYNE3-205ENST00000557275 RAB36O95755 333 aa8.79□□□□□ -1
Retrieved 100 of 20,778 RNA–protein pairs in 42.2 ms