RNA–Protein interactions for RNA: ENST00000556992.1

SRP54-212, Transcript of signal recognition particle 54, humanhuman

TSL 2

Gene SRP54, Length 529 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRP54-212ENST00000556992 TSGA13Q96PP4 275 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 CCT8L2Q96SF2 557 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 LGMNQ99538 433 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 NAT9Q9BTE0 207 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 RHOBTB2Q9BYZ6 727 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 MAGEB5Q9BZ81 275 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 FAM107BQ9H098 131 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 SMOC2Q9H3U7 446 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 PRDM12Q9H4Q4 367 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 RETREG1Q9H6L5 497 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 CATSPERBQ9H7T0 1116 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 SYNPO2LQ9H987 977 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 KCNK9Q9NPC2 374 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 EIF2B3Q9NR50 452 aaKnown RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 TLR8Q9NR97 1041 aaKnown RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 INTS9Q9NV88 658 aaKnown RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 TMEM30AQ9NV96 361 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 DNAJC17Q9NVM6 304 aaKnown RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 NKIRAS1Q9NYS0 192 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 CALCOCO1Q9P1Z2 691 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 HSFX1Q9UBD0 423 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 GGA2Q9UJY4 613 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 DYNC1LI1Q9Y6G9 523 aaKnown RBP4.53□□□□□ -1.68
SRP54-212ENST00000556992 TEX264Q9Y6I9 313 aa4.53□□□□□ -1.68
SRP54-212ENST00000556992 IQANK1A0A1B0GTG1 560 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 TCRBV7S3A2A0A539 114 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 FAM47DPA6NHR8 397 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 ZAR1LA6NP61 321 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 RASA4BC9J798 803 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 POC1B-GALNT4F8VUJ3 575 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 IRAK2O43187 625 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 RASA4O43374 803 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 AVILO75366 819 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 SCAF4O95104 1147 aaKnown RBP4.52□□□□□ -1.69
SRP54-212ENST00000556992 METTL18O95568 372 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 FAM107AO95990 144 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 APOEP02649 317 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 MT-ND3P03897 115 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 OR4Q2P0C623 313 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 SRGAP2BP0DMP2 458 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 BRAFP15056 766 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 PPP3CCP48454 512 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 NPY2RP49146 381 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 NDST2P52849 883 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 ARPP19P56211 112 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 TBX4P57082 545 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 C21orf58P58505 322 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 GPX6P59796 221 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 PPIDQ08752 370 aaKnown RBP4.52□□□□□ -1.69
SRP54-212ENST00000556992 GALNT2Q10471 571 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 WASHC5Q12768 1159 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 TEX44Q53QW1 395 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 ARMC3Q5W041 872 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 NUGGCQ68CJ6 796 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 TPGS2Q68CL5 300 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 TTC19Q6DKK2 380 aaPredicted RBP4.52□□□□□ -1.69
SRP54-212ENST00000556992 SLC8B1Q6J4K2 584 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 MSANTD2Q6P1R3 559 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 FUT10Q6P4F1 479 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 LRRC8BQ6P9F7 803 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 ZNF449Q6P9G9 518 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 DENND5BQ6ZUT9 1274 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 HTR3DQ70Z44 454 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 CTU1Q7Z7A3 348 aaKnown RBP4.52□□□□□ -1.69
SRP54-212ENST00000556992 DEFB128Q7Z7B8 93 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 LINC00523Q86TU6 105 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 TAC4Q86UU9 113 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 CAND1Q86VP6 1230 aaKnown RBP4.52□□□□□ -1.69
SRP54-212ENST00000556992 NLRP14Q86W24 1093 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 SLC26A11Q86WA9 606 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 ADGRG3Q86Y34 549 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 GPR65Q8IYL9 337 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 ATP6V0D2Q8N8Y2 350 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 ATAD1Q8NBU5 361 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 ZNF461Q8TAF7 563 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 MDM1Q8TC05 714 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 DYDC1Q8WWB3 177 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 OVCA2Q8WZ82 227 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 TOP1MTQ969P6 601 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 TBC1D31Q96DN5 1066 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 CHMP6Q96FZ7 201 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 IGSF21Q96ID5 467 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 MAGEB10Q96LZ2 347 aaPredicted RBP4.52□□□□□ -1.69
SRP54-212ENST00000556992 TEKT5Q96M29 485 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 WDR92Q96MX6 357 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 XPO6Q96QU8 1125 aaKnown RBP4.52□□□□□ -1.69
SRP54-212ENST00000556992 SMC6Q96SB8 1091 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 EBNA1BP2Q99848 306 aaKnown RBP4.52□□□□□ -1.69
SRP54-212ENST00000556992 SELENOSQ9BQE4 189 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 SIK2Q9H0K1 926 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 TRABDQ9H4I3 376 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 PRDM13Q9H4Q3 707 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 CCDC134Q9H6E4 229 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 PPANQ9NQ55 473 aaKnown RBP4.52□□□□□ -1.69
SRP54-212ENST00000556992 POLR3BQ9NW08 1133 aaPredicted RBP4.52□□□□□ -1.69
SRP54-212ENST00000556992 BFARQ9NZS9 450 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 SEPT10Q9P0V9 454 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 IGSF9Q9P2J2 1179 aa4.52□□□□□ -1.69
SRP54-212ENST00000556992 PSMC3IPQ9P2W1 217 aaPredicted RBP4.52□□□□□ -1.69
SRP54-212ENST00000556992 SFMBT1Q9UHJ3 866 aa4.52□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms