RNA–Protein interactions for RNA: ENST00000556374.5

ATXN3-241, Transcript of ataxin 3, humanhuman

TSL 1 (best)

Gene ATXN3, Length 1,083 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATXN3-241ENST00000556374 RARBP10826 455 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 MLNP12872 115 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CCDC130P13994 396 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 ANPEPP15144 967 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 PGAM1P18669 254 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 AOC1P19801 751 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 PROZP22891 400 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SP100P23497 879 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CYP2F1P24903 491 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 IL1R2P27930 398 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 RBL1P28749 1068 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CRHR1P34998 444 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SERPINB6P35237 376 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 ACADSBP45954 432 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 GABRB2P47870 512 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CPA2P48052 419 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CDK7P50613 346 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CLCN3P51790 818 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 KPNA2P52292 529 aaKnown RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 RAP1GDS1P52306 607 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 NDST1P52848 882 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CACNA2D1P54289 1103 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 BCAT1P54687 386 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 AQP5P55064 265 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 IGBP1P78318 339 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 XIAPP98170 497 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 ROR2Q01974 943 aaKnown RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 GAD2Q05329 585 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 MBTD1Q05BQ5 628 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 KDSRQ06136 332 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 INCA1Q0VD86 236 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 BST1Q10588 318 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 WASHC5Q12768 1159 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 MTM1Q13496 603 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SPIDRQ14159 915 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 KCTD2Q14681 263 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 ELAVL1Q15717 326 aaKnown RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CCDC142Q17RM4 750 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 C15orf59Q2T9L4 293 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CCDC153Q494R4 210 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 ACSBG2Q5FVE4 666 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 MDH1BQ5I0G3 518 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SPANXN3Q5MJ09 141 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 STXBP5Q5T5C0 1151 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 FAXCQ5TGI0 409 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 IQSEC1Q6DN90 963 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 JADE1Q6IE81 842 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 TIGD7Q6NT04 549 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 EFCAB12Q6NXP0 572 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 RFWD3Q6PCD5 774 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 AAGABQ6PD74 315 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 LCLAT1Q6UWP7 414 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 NPNTQ6UXI9 565 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 IZUMO2Q6UXV1 221 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 UBE2R2Q712K3 238 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 GAREM2Q75VX8 874 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 RHOUQ7L0Q8 258 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CMTM4Q8IZR5 234 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 ICA1LQ8NDH6 482 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 STKLD1Q8NE28 680 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CATSPER1Q8NEC5 780 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 BEST2Q8NFU1 509 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 GABPB2Q8TAK5 448 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 UBA3Q8TBC4 463 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 DTX3LQ8TDB6 740 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 PPP2R3CQ969Q6 453 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CLIP3Q96DZ5 547 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 DTNBP1Q96EV8 351 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SERAC1Q96JX3 654 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SPATA13Q96N96 652 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 KCNK16Q96T55 309 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 EBNA1BP2Q99848 306 aaKnown RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SNRNP25Q9BV90 132 aaKnown RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CADM1Q9BY67 442 aaKnown RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 NFKBIZQ9BYH8 718 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SENP6Q9GZR1 1112 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 ELOVL4Q9GZR5 314 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SNX25Q9H3E2 840 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 DHX35Q9H5Z1 703 aaKnown RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 NRDE2Q9H7Z3 1164 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 C10orf88Q9H8K7 445 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 EIF2B3Q9NR50 452 aaKnown RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 MRGBPQ9NV56 204 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 DNAJC28Q9NX36 388 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 USP36Q9P275 1121 aaKnown RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 RCOR3Q9P2K3 495 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 MARCOQ9UEW3 520 aaPredicted RBP4.45□□□□□ -1.7
ATXN3-241ENST00000556374 DCDC2Q9UHG0 476 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 ZNF112Q9UJU3 913 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 ADAM28Q9UKQ2 775 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 ADAMTS5Q9UNA0 930 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SSX2IPQ9Y2D8 614 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 ATP11BQ9Y2G3 1177 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SLC45A1Q9Y2W3 748 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 DERAQ9Y315 318 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 PLLPQ9Y342 182 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 C2CD2Q9Y426 696 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 SPO11Q9Y5K1 396 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CDY2AQ9Y6F7 541 aa4.45□□□□□ -1.7
ATXN3-241ENST00000556374 CDY1Q9Y6F8 540 aa4.45□□□□□ -1.7
Retrieved 100 of 20,778 RNA–protein pairs in 24.2 ms