RNA–Protein interactions for RNA: ENST00000555880.5

TDP1-213, Transcript of tyrosyl-DNA phosphodiesterase 1, humanhuman

TSL 5 BASIC

Gene TDP1, Length 1,894 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TDP1-213ENST00000555880 SOAT2O75908 522 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 OAZ2O95190 189 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 MATN4O95460 622 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 PYGLP06737 847 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 HSD17B1P14061 328 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 HGFP14210 728 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 ZNF23P17027 643 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 FASP25445 335 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 MAGEA11P43364 429 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 SUOXP51687 545 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 KPNA1P52294 538 aaPredicted RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 STC1P52823 247 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 KCNK10P57789 538 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 ESRRGP62508 458 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 TUBA4AP68366 448 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 PLOD1Q02809 727 aaPredicted RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 GALNT3Q14435 633 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 LPIN1Q14693 890 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 OR4D1Q15615 310 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 EML3Q32P44 896 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 UGT3A2Q3SY77 523 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 VPS26BQ4G0F5 336 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 AASDHQ4L235 1098 aaPredicted RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 SDHAF4Q5VUM1 108 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 PPP4R4Q6NUP7 873 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 FBXL22Q6P050 247 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 RNF19BQ6ZMZ0 732 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 SPATA19Q7Z5L4 167 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 MYO1HQ8N1T3 1032 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 FAM160A2Q8N612 972 aaPredicted RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 TRPC4APQ8TEL6 797 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 TADA1Q96BN2 335 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 C3orf30Q96M34 536 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 ZNF599Q96NL3 588 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 CYP2S1Q96SQ9 504 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 AARSD1Q9BTE6 412 aaKnown RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 C9orf16Q9BUW7 83 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 TRIM54Q9BYV2 358 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 ANKRD60Q9BZ19 345 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 RBM38Q9H0Z9 239 aaKnown RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 CAAP1Q9H8G2 361 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 CLK4Q9HAZ1 481 aaKnown RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 TLR8Q9NR97 1041 aaKnown RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 CCM2LQ9NUG4 571 aaPredicted RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 POLR3BQ9NW08 1133 aaPredicted RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 ACTR3BQ9P1U1 418 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 ABCD2Q9UBJ2 740 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 SUN2Q9UH99 717 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 RSL24D1Q9UHA3 163 aaKnown RBP6.97□□□□□ -1.29
TDP1-213ENST00000555880 RIMKLBQ9ULI2 386 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 SLC8A2Q9UPR5 921 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 ARL5AQ9Y689 179 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 AK5Q9Y6K8 562 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 GBF1Q92538 1859 aa6.97□□□□□ -1.29
TDP1-213ENST00000555880 MYOCOSA0A1B0GUC4 107 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 KANSL1LA0AUZ9 987 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 SLC12A8A0AV02 714 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 C7orf72A4D263 438 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 KLHL33A6NCF5 533 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 ANKRD33BA6NCL7 494 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 DRGXA6NNA5 263 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 F8W810 466 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 H3BNH8 94 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 NME4O00746 187 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 INPPL1O15357 1258 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 GDF9O60383 454 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 SIX3O95343 332 aaPredicted RBP6.96□□□□□ -1.29
TDP1-213ENST00000555880 NDST3O95803 873 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 GPIP06744 558 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 HMBSP08397 361 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 LINC00032P0C843 101 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 ATP6V1B2P21281 511 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 EEF1DP29692 281 aaKnown RBP6.96□□□□□ -1.29
TDP1-213ENST00000555880 GRK4P32298 578 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 OR1G1P47890 313 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 TM4SF4P48230 202 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 KCNC1P48547 511 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 PRR20EP86478 221 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 PRR20CP86479 221 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 PRR20DP86480 221 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 PRR20BP86481 221 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 PRR20AP86496 221 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 CLCQ05315 142 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 RING1Q06587 406 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 TYSND1Q2T9J0 566 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 PABPC1LQ4VXU2 614 aaKnown RBP6.96□□□□□ -1.29
TDP1-213ENST00000555880 PITRM1Q5JRX3 1037 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 INTS11Q5TA45 600 aaKnown RBP6.96□□□□□ -1.29
TDP1-213ENST00000555880 ANKS6Q68DC2 871 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 LCN8Q6JVE9 175 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 ZNF549Q6P9A3 640 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 AFTPHQ6ULP2 937 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 CYHR1Q6ZMK1 362 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 RETREG3Q86VR2 466 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 FUNDC1Q8IVP5 155 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 PGBD5Q8N414 524 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 NKAPQ8N5F7 415 aaKnown RBP6.96□□□□□ -1.29
TDP1-213ENST00000555880 PNPLA1Q8N8W4 532 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 TSPEARQ8WU66 669 aa6.96□□□□□ -1.29
TDP1-213ENST00000555880 CANT1Q8WVQ1 401 aa6.96□□□□□ -1.29
Retrieved 100 of 20,778 RNA–protein pairs in 38.3 ms