RNA–Protein interactions for RNA: ENST00000555541.1

SNX6-204, Transcript of sorting nexin 6, humanhuman

TSL 5

Gene SNX6, Length 339 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNX6-204ENST00000555541 ZNF624Q9P2J8 865 aaPredicted RBP3.35□□□□□ -1.87
SNX6-204ENST00000555541 TBX20Q9UMR3 447 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 FAF1Q9UNN5 650 aaPredicted RBP3.35□□□□□ -1.87
SNX6-204ENST00000555541 CEPT1Q9Y6K0 416 aa3.35□□□□□ -1.87
SNX6-204ENST00000555541 SMIM1B2RUZ4 78 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 TSPAN4O14817 238 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 KRTAP5-8O75690 187 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 GNB3P16520 340 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 ZNF10P21506 573 aaPredicted RBP3.34□□□□□ -1.87
SNX6-204ENST00000555541 CNTFP26441 200 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 TERF1P54274 439 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 DRG2P55039 364 aaKnown RBP3.34□□□□□ -1.87
SNX6-204ENST00000555541 FOXM1Q08050 763 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 GALNT2Q10471 571 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 GAGE5Q13069 117 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 GAGE6Q13070 117 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 TRPC3Q13507 836 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 GPR68Q15743 365 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 BAK1Q16611 211 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 CCDC96Q2M329 555 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 PRICKLE4Q2TBC4 344 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 WDR38Q5JTN6 314 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 SIRPB2Q5JXA9 342 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 C6orf141Q5SZD1 244 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 LCE1CQ5T751 118 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 LCE1BQ5T7P3 118 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 ATF7IPQ6VMQ6 1270 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 SPAG16Q8N0X2 631 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 LYG1Q8N1E2 194 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 BEST3Q8N1M1 668 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 ZNF248Q8NDW4 579 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 FCAMRQ8WWV6 532 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 ORAI1Q96D31 301 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 KIF1BPQ96EK5 621 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 GRAMD2BQ96HH9 432 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 LRR1Q96L50 414 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 QRFPRQ96P65 431 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 BRF2Q9HAW0 419 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 KCND2Q9NZV8 630 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 PAK5Q9P286 719 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 NOL12Q9UGY1 213 aaKnown RBP eCLIP3.34□□□□□ -1.87
SNX6-204ENST00000555541 PADI3Q9ULW8 664 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 DGKBQ9Y6T7 804 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 PTPRCP08575 1304 aa3.34□□□□□ -1.87
SNX6-204ENST00000555541 TTC36A6NLP5 189 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 VCYO14598 125 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 ZNHIT1O43257 154 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 SPINT2O43291 252 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 PRKNO60260 465 aaPredicted RBP3.33□□□□□ -1.88
SNX6-204ENST00000555541 ZNF821O75541 412 aaPredicted RBP3.33□□□□□ -1.88
SNX6-204ENST00000555541 SEC31AO94979 1220 aaKnown RBP3.33□□□□□ -1.88
SNX6-204ENST00000555541 EGFP01133 1207 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 IGHV4-39P01824 125 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 POLBP06746 335 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 CD48P09326 243 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 PRSS56P0CW18 603 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 ZNF26P17031 533 aaPredicted RBP3.33□□□□□ -1.88
SNX6-204ENST00000555541 TAS2R38P59533 333 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 IRX1P78414 480 aaPredicted RBP3.33□□□□□ -1.88
SNX6-204ENST00000555541 FGFBP1Q14512 234 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 ALG11Q2TAA5 492 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 COL28A1Q2UY09 1125 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 TTI2Q6NXR4 508 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 C15orf39Q6ZRI6 1047 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 ACVR1CQ8NER5 493 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 OR5R1Q8NH85 324 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 HMGCLL1Q8TB92 370 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 SCRN2Q96FV2 425 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 NEURL2Q9BR09 285 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 SEBOXQ9HB31 216 aaPredicted RBP3.33□□□□□ -1.88
SNX6-204ENST00000555541 GGA3Q9NZ52 723 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 SARDHQ9UL12 918 aa3.33□□□□□ -1.88
SNX6-204ENST00000555541 AAR2Q9Y312 384 aaKnown RBP3.33□□□□□ -1.88
SNX6-204ENST00000555541 LRRC53A6NM62 1247 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 FAM106CPP0CH98 169 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 POLR2CP19387 275 aaPredicted RBP3.32□□□□□ -1.88
SNX6-204ENST00000555541 CHRNB4P30926 498 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 ABCD1P33897 745 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 ARL1P40616 181 aaPredicted RBP3.32□□□□□ -1.88
SNX6-204ENST00000555541 RUNX1T1Q06455 604 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 PTP4A2Q12974 167 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 DRAP1Q14919 205 aaPredicted RBP3.32□□□□□ -1.88
SNX6-204ENST00000555541 DECR1Q16698 335 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 SFMBT2Q5VUG0 894 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 SIGIRRQ6IA17 410 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 SPINK14Q6IE38 97 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 OR7E24Q6IFN5 339 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 FAM171BQ6P995 826 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 CACNA2D4Q7Z3S7 1137 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 NRROSQ86YC3 692 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 THAP6Q8TBB0 222 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 TAAR8Q969N4 342 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 PPP1R13BQ96KQ4 1090 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 NEUROD6Q96NK8 337 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 TMEM47Q9BQJ4 181 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 VEZTQ9HBM0 779 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 LTB4R2Q9NPC1 389 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 ASAH2Q9NR71 780 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 SLC6A13Q9NSD5 602 aa3.32□□□□□ -1.88
SNX6-204ENST00000555541 ACSS1Q9NUB1 689 aaPredicted RBP3.32□□□□□ -1.88
Retrieved 100 of 20,778 RNA–protein pairs in 22.9 ms