RNA–Protein interactions for RNA: ENST00000553837.5

SHMT2-207, Transcript of serine hydroxymethyltransferase 2, humanhuman

TSL 5

Gene SHMT2, Length 2,152 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHMT2-207ENST00000553837 INTS11Q5TA45 600 aaKnown RBP12.21□□□□□ -0.45
SHMT2-207ENST00000553837 TMEM198Q66K66 360 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 ZNF470Q6ECI4 717 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 KCTD8Q6ZWB6 473 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 ANKRD13BQ86YJ7 626 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 PCDH20Q8N6Y1 951 aaKnown RBP12.21□□□□□ -0.45
SHMT2-207ENST00000553837 C2CD4AQ8NCU7 369 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-207ENST00000553837 MYEOVQ96EZ4 313 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 ADI1Q9BV57 179 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 YTHDF1Q9BYJ9 559 aaKnown RBP12.21□□□□□ -0.45
SHMT2-207ENST00000553837 CD320Q9NPF0 282 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 PRDM5Q9NQX1 630 aaPredicted RBP12.21□□□□□ -0.45
SHMT2-207ENST00000553837 ENTPD7Q9NQZ7 604 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 RGS18Q9NS28 235 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 MRGBPQ9NV56 204 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 NSMCE4AQ9NXX6 385 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 SCML2Q9UQR0 700 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 ACOT9Q9Y305 439 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 CORINQ9Y5Q5 1042 aa12.21□□□□□ -0.45
SHMT2-207ENST00000553837 VWA8A3KMH1 1905 aa12.21□□□□□ -0.46
SHMT2-207ENST00000553837 DYTNA2CJ06 578 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 NEMP2A6NFY4 417 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 WASH4PA8MWX3 477 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 TMEM233B4DJY2 109 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 CCL22O00626 93 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 TRIM24O15164 1050 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 CABYRO75952 493 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 CLPXO76031 633 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 SEC24DO94855 1032 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 OAZ2O95190 189 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 GNAO1P09471 354 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 PRKAR2AP13861 404 aaKnown RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 ZNF182P17025 639 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 HTR7P34969 479 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 HADHAP40939 763 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 NRG1Q02297 640 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 OXA1LQ15070 435 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 MS4A13Q5J8X5 152 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 GALNT18Q6P9A2 607 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 ABRAXAS1Q6UWZ7 409 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 ERMP1Q7Z2K6 904 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 MINDY2Q8NBR6 621 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 ATAD1Q8NBU5 361 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 SH3RF2Q8TEC5 729 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 HEXDCQ8WVB3 486 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 IGSF8Q969P0 613 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 ELMO2Q96JJ3 720 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 PSD2Q9BQI7 771 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 FSD1LQ9BXM9 530 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 MROQ9BYG7 248 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 ATP13A1Q9HD20 1204 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 NT5MQ9NPB1 228 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 DAPK2Q9UIK4 370 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 NOD1Q9Y239 953 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 DOCK4Q8N1I0 1966 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 PLXNA3P51805 1871 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 CA12O43570 354 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 TIPRLO75663 272 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 CKBP12277 381 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 ARSAP15289 507 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 OR1G1P47890 313 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 GSSP48637 474 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 PCYT1AP49585 367 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 DSC2Q02487 901 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 GNA12Q03113 381 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 EFEMP1Q12805 493 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 E2F2Q14209 437 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 SPCS2Q15005 226 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 MAPRE2Q15555 327 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 PSMD5Q16401 504 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 SLC36A3Q495N2 470 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 KIAA0930Q6ICG6 404 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 IGFN1Q86VF2 1251 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 MON1AQ86VX9 555 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 CIR1Q86X95 450 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 CCDC117Q8IWD4 279 aaPredicted RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 ZC3H7AQ8IWR0 971 aaKnown RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 PGBD5Q8N414 524 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 TXNDC5Q8NBS9 432 aaKnown RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 RDH11Q8TC12 318 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 PNPT1Q8TCS8 783 aaKnown RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 IMP4Q96G21 291 aaKnown RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 C1orf74Q96LT6 269 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 SERPINB11Q96P15 392 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 NAA50Q9GZZ1 169 aaKnown RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 MRM3Q9HC36 420 aaKnown RBP12.2□□□□□ -0.46
SHMT2-207ENST00000553837 SPAG4Q9NPE6 437 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 IGSF5Q9NSI5 407 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 TBC1D13Q9NVG8 400 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 FBXO5Q9UKT4 447 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 SARDHQ9UL12 918 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 SATB2Q9UPW6 733 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 TLR6Q9Y2C9 796 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 CPQQ9Y646 472 aa12.2□□□□□ -0.46
SHMT2-207ENST00000553837 ALOX5P09917 674 aa12.19□□□□□ -0.46
SHMT2-207ENST00000553837 C7P10643 843 aa12.19□□□□□ -0.46
SHMT2-207ENST00000553837 STMN1P16949 149 aa12.19□□□□□ -0.46
SHMT2-207ENST00000553837 KCNA5P22460 613 aa12.19□□□□□ -0.46
SHMT2-207ENST00000553837 CD86P42081 329 aa12.19□□□□□ -0.46
SHMT2-207ENST00000553837 TBX4P57082 545 aa12.19□□□□□ -0.46
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms