RNA–Protein interactions for RNA: ENST00000550219.1

NUP188-211, Transcript of nucleoporin 188, humanhuman

TSL 1 (best)

Gene NUP188, Length 886 nt, Biotype processed transcript, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUP188-211ENST00000550219 NUDCD1Q96RS6 583 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 MGME1Q9BQP7 344 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 NOD2Q9HC29 1040 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 NT5MQ9NPB1 228 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 PHPT1Q9NRX4 125 aaPredicted RBP13.38□□□□□ -0.27
NUP188-211ENST00000550219 HOMER3Q9NSC5 361 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 LOXL2Q9Y4K0 774 aa13.38□□□□□ -0.27
NUP188-211ENST00000550219 NPIPB15A6NHN6 443 aaPredicted RBP13.37□□□□□ -0.27
NUP188-211ENST00000550219 HACD1B0YJ81 288 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 LIASO43766 372 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 MAFKO60675 156 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 HEXIM1O94992 359 aaKnown RBP13.37□□□□□ -0.27
NUP188-211ENST00000550219 MAP3K6O95382 1288 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 PEX11BO96011 259 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 CYP2A6P11509 494 aaPredicted RBP13.37□□□□□ -0.27
NUP188-211ENST00000550219 GLB1P16278 677 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 ITIH1P19827 911 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 LHCGRP22888 699 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 NFKBIAP25963 317 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 SLC5A2P31639 672 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 ETV3P41162 512 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 MLLT3P42568 568 aaPredicted RBP13.37□□□□□ -0.27
NUP188-211ENST00000550219 GNPDA1P46926 289 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 SKOR1P84550 965 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 PPIDQ08752 370 aaKnown RBP13.37□□□□□ -0.27
NUP188-211ENST00000550219 ITKQ08881 620 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 EIF3IQ13347 325 aaKnown RBP13.37□□□□□ -0.27
NUP188-211ENST00000550219 BIRC2Q13490 618 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 LY6DQ14210 128 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 OASLQ15646 514 aaKnown RBP13.37□□□□□ -0.27
NUP188-211ENST00000550219 PHF19Q5T6S3 580 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 CCDC81Q6ZN84 652 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 USP45Q70EL2 814 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 HSD11B1LQ7Z5J1 315 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 SPRED1Q7Z699 444 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 TSPAN33Q86UF1 283 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 LSM14AQ8ND56 463 aaKnown RBP13.37□□□□□ -0.27
NUP188-211ENST00000550219 DTD2Q96FN9 168 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 L2HGDHQ9H9P8 463 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 LRIT1Q9P2V4 623 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 TTLL3Q9Y4R7 772 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 PTPRQQ9UMZ3 2332 aa13.37□□□□□ -0.27
NUP188-211ENST00000550219 ASXL3Q9C0F0 2248 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 A0A0U1RQS6 177 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 A0A1W2PQ67 120 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 TNFRSF10CO14798 259 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 PPP1R12AO14974 1030 aaPredicted RBP13.36□□□□□ -0.27
NUP188-211ENST00000550219 HTRA2O43464 458 aaPredicted RBP13.36□□□□□ -0.27
NUP188-211ENST00000550219 RBP3P10745 1247 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 CR2P20023 1033 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 CCNCP24863 283 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 AK4P27144 223 aaPredicted RBP13.36□□□□□ -0.27
NUP188-211ENST00000550219 CCKBRP32239 447 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 TRIM23P36406 574 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 MAPK10P53779 464 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 EIF3EP60228 445 aaKnown RBP13.36□□□□□ -0.27
NUP188-211ENST00000550219 CDK3Q00526 305 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 ILF3Q12906 894 aaKnown RBP eCLIP13.36□□□□□ -0.27
NUP188-211ENST00000550219 HLTFQ14527 1009 aaKnown RBP eCLIP13.36□□□□□ -0.27
NUP188-211ENST00000550219 PRKD1Q15139 912 aaPredicted RBP13.36□□□□□ -0.27
NUP188-211ENST00000550219 AMZ1Q400G9 498 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 ARMC12Q5T9G4 340 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 MARC1Q5VT66 337 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 SLC30A9Q6PML9 568 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 ZNF605Q86T29 641 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 PTCD2Q8WV60 388 aaKnown RBP13.36□□□□□ -0.27
NUP188-211ENST00000550219 C1orf54Q8WWF1 131 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 ATG4AQ8WYN0 398 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 MAML1Q92585 1016 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 QKIQ96PU8 341 aaKnown RBP eCLIP13.36□□□□□ -0.27
NUP188-211ENST00000550219 AP1M1Q9BXS5 423 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 GSDMCQ9BYG8 508 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 ZMYND15Q9H091 742 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 CD84Q9UIB8 345 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 DNPEPQ9ULA0 475 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 PHTF1Q9UMS5 762 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 SUFUQ9UMX1 484 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 DRG1Q9Y295 367 aaKnown RBP13.36□□□□□ -0.27
NUP188-211ENST00000550219 RP1P56715 2156 aa13.36□□□□□ -0.27
NUP188-211ENST00000550219 GOLGA6L10A0A0M3HER8 536 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 TMX2-CTNND1H3BSU7 103 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 CCDC188H7C350 402 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 K7ENP7 123 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 MATN3O15232 486 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 PHF2O75151 1096 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 ZNF189O75820 626 aaPredicted RBP13.35□□□□□ -0.27
NUP188-211ENST00000550219 PGLSO95336 258 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 HOXC4P09017 264 aaPredicted RBP13.35□□□□□ -0.27
NUP188-211ENST00000550219 PLA2G2AP14555 144 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 CCNB1P14635 433 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 POLD2P49005 469 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 CKAP4Q07065 602 aaKnown RBP13.35□□□□□ -0.27
NUP188-211ENST00000550219 SRSF6Q13247 344 aaKnown RBP13.35□□□□□ -0.27
NUP188-211ENST00000550219 TGIF1Q15583 401 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 DNTTIP2Q5QJE6 756 aaKnown RBP13.35□□□□□ -0.27
NUP188-211ENST00000550219 INO80CQ6PI98 192 aaPredicted RBP13.35□□□□□ -0.27
NUP188-211ENST00000550219 OGFOD3Q6PK18 319 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 Q6ZVL8 140 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 TRIM74Q86UV6 250 aa13.35□□□□□ -0.27
NUP188-211ENST00000550219 ZC3H18Q86VM9 953 aaKnown RBP13.35□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms