RNA–Protein interactions for RNA: ENST00000547672.5

PTCH1-215, Transcript of patched 1, humanhuman

TSL 1 (best)

Gene PTCH1, Length 881 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCH1-215ENST00000547672 TECRLQ5HYJ1 363 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 FAM46CQ5VWP2 391 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 TMEM215Q68D42 235 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 TRIM68Q6AZZ1 485 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 CGB2Q6NT52 195 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 ZNF549Q6P9A3 640 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 VITQ6UXI7 678 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 LDB1Q86U70 411 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-215ENST00000547672 SERPINA9Q86WD7 417 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 CYB5D2Q8WUJ1 264 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 KIAA1191Q96A73 305 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 RSPRY1Q96DX4 576 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 PANX3Q96QZ0 392 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 ZNF576Q9H609 170 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 PFDN4Q9NQP4 134 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 ZNF358Q9NW07 568 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 ZDHHC3Q9NYG2 299 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 NFKBIL1Q9UBC1 381 aaPredicted RBP13.36□□□□□ -0.27
PTCH1-215ENST00000547672 XPR1Q9UBH6 696 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 DCTN4Q9UJW0 460 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 DHRS7Q9Y394 339 aa13.36□□□□□ -0.27
PTCH1-215ENST00000547672 MYO7AQ13402 2215 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 GOLGA8QA0A0J9YX86 632 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 GOLGA8OA6NCC3 632 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 NPIPB15A6NHN6 443 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-215ENST00000547672 AGAP14A8MT82 685 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 C1QTNF3-AMACRE9PGA6 284 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 GOLGA8NF8WBI6 632 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 H0Y858 1186 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 EIF3FO00303 357 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-215ENST00000547672 DLX3O60479 287 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 WISP3O95389 354 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-215ENST00000547672 CBSLP0DN79 551 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 ZNF37AP17032 561 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-215ENST00000547672 TFEBP19484 476 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 IMPDH1P20839 514 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 DGKAP23743 735 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 FCARP24071 287 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 ACRV1P26436 265 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 GKP32189 559 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 CBSP35520 551 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 TNFRSF4P43489 277 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 GLRBP48167 497 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 SPINT3P49223 89 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 RPL14P50914 215 aaKnown RBP13.35□□□□□ -0.27
PTCH1-215ENST00000547672 NAGLUP54802 743 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 NFKB2Q00653 900 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 OVGP1Q12889 678 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 SEMA3AQ14563 771 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 METTL21CQ5VZV1 264 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 LRRC66Q68CR7 880 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 PSAPL1Q6NUJ1 521 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 TXNDC11Q6PKC3 985 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 FAM151BQ6UXP7 276 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 MACC1Q6ZN28 852 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 ISCA2Q86U28 154 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 NXPE1Q8N323 547 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 TMEM151AQ8N4L1 468 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 TERB1Q8NA31 727 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 CHST14Q8NCH0 376 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 KCNV2Q8TDN2 545 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 CSGALNACT1Q8TDX6 532 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 RAB7BQ96AH8 199 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 DCUN1D1Q96GG9 259 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 RILPQ96NA2 401 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 BIRC8Q96P09 236 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 COPS8Q99627 209 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 GATA5Q9BWX5 397 aaPredicted RBP13.35□□□□□ -0.27
PTCH1-215ENST00000547672 TMEM120AQ9BXJ8 343 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 S1PR5Q9H228 398 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 P2RY12Q9H244 342 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 FAM83DQ9H4H8 585 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 DNAJC28Q9NX36 388 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 ZFP69BQ9UJL9 534 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 DNAJC16Q9Y2G8 782 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 WASF2Q9Y6W5 498 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 MYOFQ9NZM1 2061 aa13.35□□□□□ -0.27
PTCH1-215ENST00000547672 CFAP73A6NFT4 308 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 TRPC5OSA6NMA1 111 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 C16orf96A6NNT2 1141 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 RFXAPO00287 272 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 RNASEH1O60930 286 aaKnown RBP13.34□□□□□ -0.27
PTCH1-215ENST00000547672 AP2A2O94973 939 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 TOP3BO95985 862 aaKnown RBP13.34□□□□□ -0.27
PTCH1-215ENST00000547672 OR56A5P0C7T3 313 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 CD1DP15813 335 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 TIMP2P16035 220 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 POU3F3P20264 500 aaPredicted RBP13.34□□□□□ -0.27
PTCH1-215ENST00000547672 ITGB7P26010 798 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 PTSQ03393 145 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 CHRNA6Q15825 494 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 ZNF284Q2VY69 593 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 GALNTL6Q49A17 601 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 SERPINA13PQ6UXR4 307 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 TRIM67Q6ZTA4 783 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 DPPA4Q7L190 304 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 PIANPQ8IYJ0 282 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 NXPE3Q969Y0 559 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 ZSCAN5AQ9BUG6 496 aa13.34□□□□□ -0.27
PTCH1-215ENST00000547672 APOL5Q9BWW9 433 aa13.34□□□□□ -0.27
Retrieved 100 of 20,778 RNA–protein pairs in 23.5 ms