RNA–Protein interactions for RNA: ENST00000547654.5

SCAF11-210, Transcript of SR-related CTD associated factor 11, humanhuman

TSL 2

Gene SCAF11, Length 416 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCAF11-210ENST00000547654 GLRA4Q5JXX5 417 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 TMEM268Q5VZI3 342 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 KRT39Q6A163 491 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 RANBP10Q6VN20 620 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 CFAP77Q6ZQR2 320 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 MDGA2Q7Z553 956 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 TFAP2DQ7Z6R9 452 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 PIM3Q86V86 326 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 SYCP3Q8IZU3 236 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 PI4KAP1Q8N8J0 262 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 TSPAN14Q8NG11 270 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 FIBINQ8TAL6 211 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 FAM110DQ8TAY7 271 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-210ENST00000547654 LPGAT1Q92604 370 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 TAF4BQ92750 862 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 AK8Q96MA6 479 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 TEFMQ96QE5 360 aaKnown RBP4.31□□□□□ -1.72
SCAF11-210ENST00000547654 OR2A14Q96R47 310 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 SIN3AQ96ST3 1273 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 THAP9Q9H5L6 903 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 MTPAPQ9NVV4 582 aaKnown RBP eCLIP4.31□□□□□ -1.72
SCAF11-210ENST00000547654 AKAP7Q9P0M2 348 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-210ENST00000547654 CNOT8Q9UFF9 292 aaKnown RBP4.31□□□□□ -1.72
SCAF11-210ENST00000547654 LIPT1Q9Y234 373 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 DTX4Q9Y2E6 619 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 CLDN16Q9Y5I7 305 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 SIRT4Q9Y6E7 314 aaPredicted RBP4.31□□□□□ -1.72
SCAF11-210ENST00000547654 STRCQ7RTU9 1775 aa4.31□□□□□ -1.72
SCAF11-210ENST00000547654 SETD1AO15047 1707 aaKnown RBP4.31□□□□□ -1.72
SCAF11-210ENST00000547654 ZMYM2Q9UBW7 1377 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 IGSF1Q8N6C5 1336 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 GPR75-ASB3A0A0A6YYF3 556 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 EDDM13A0A1B0GTR0 161 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 MBD3L2BA0A1B0GVZ6 204 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 CLIC1O00299 241 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 PRYO14603 147 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 PGRMC2O15173 223 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 SEC14L5O43304 696 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 TLR2O60603 784 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 ZC3H11AO75152 810 aaKnown RBP eCLIP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 HMMRO75330 724 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 STAM2O75886 525 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 MT-CYBP00156 380 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 SLC4A1P02730 911 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 T-ENOLP0DO92 83 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 SRCP12931 536 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 MMP9P14780 707 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 PTPN2P17706 415 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 EDN2P20800 178 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 CASTP20810 708 aaKnown RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 TCEA1P23193 301 aaKnown RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 MAPK3P27361 379 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 HSPA4P34932 840 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 CYP2J2P51589 502 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 ID2Q02363 134 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 ACTN3Q08043 901 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 DMWDQ09019 674 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 GAB1Q13480 694 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 MFSD13AQ14CX5 517 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 PTPN14Q15678 1187 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 ME3Q16798 604 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 ANXA2RQ3ZCQ2 193 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 LEXMQ3ZCV2 418 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 SETMARQ53H47 684 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 TMEM63BQ5T3F8 832 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 PPP1R21Q6ZMI0 780 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 DCDC5Q6ZRR9 648 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 CLEC17AQ6ZS10 378 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 SEPT14Q6ZU15 432 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 NUP54Q7Z3B4 507 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 TBC1D26Q86UD7 250 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 HOOK3Q86VS8 718 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 ANKRD13BQ86YJ7 626 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 ARID3BQ8IVW6 561 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 CCDC13Q8IYE1 715 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 HACE1Q8IYU2 909 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 RNF168Q8IYW5 571 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 GUF1Q8N442 669 aaKnown RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 ANKRD20A12PQ8NF67 263 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 ERO1AQ96HE7 468 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 CCDC17Q96LX7 622 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 CEP295NLQ96MC4 621 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 RUNDC3BQ96NL0 473 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 CAMK1GQ96NX5 476 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 FRG2BQ96QU4 278 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 MLPHQ9BV36 600 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 TNMDQ9H2S6 317 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 CXorf56Q9H5V9 222 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 Q9N2J8 555 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 BPIFA1Q9NP55 256 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 IL1RAPL2Q9NP60 686 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 MID1IP1Q9NPA3 183 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 SIRT3Q9NTG7 399 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 TRMT1Q9NXH9 659 aaKnown RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 GRHL1Q9NZI5 618 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 NLKQ9UBE8 527 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 ARMCX3Q9UH62 379 aaPredicted RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 HOOK1Q9UJC3 728 aaKnown RBP4.3□□□□□ -1.72
SCAF11-210ENST00000547654 SLC8A2Q9UPR5 921 aa4.3□□□□□ -1.72
SCAF11-210ENST00000547654 ICKQ9UPZ9 632 aa4.3□□□□□ -1.72
Retrieved 100 of 20,778 RNA–protein pairs in 21.3 ms