RNA–Protein interactions for RNA: ENST00000544504.5

YBX3-215, Transcript of Y-box binding protein 3, humanhuman

TSL 3

Gene YBX3, Length 583 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
YBX3-215ENST00000544504 KHNYNO15037 678 aaKnown RBP9.48□□□□□ -0.89
YBX3-215ENST00000544504 MID1O15344 667 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 HYAL3O43820 417 aaPredicted RBP9.48□□□□□ -0.89
YBX3-215ENST00000544504 ZIC2O95409 532 aaPredicted RBP9.48□□□□□ -0.89
YBX3-215ENST00000544504 CLDN7O95471 211 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 SLC4A1P02730 911 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 PRKCGP05129 697 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 PYGLP06737 847 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 ELFN1P0C7U0 828 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 ITGALP20701 1170 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 OGNP20774 298 aaKnown RBP9.48□□□□□ -0.89
YBX3-215ENST00000544504 SPAM1P38567 509 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 GP5P40197 560 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 ARCN1P48444 511 aaKnown RBP9.48□□□□□ -0.89
YBX3-215ENST00000544504 TTPAP49638 278 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 COPAP53621 1224 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 CSE1LP55060 971 aaKnown RBP9.48□□□□□ -0.89
YBX3-215ENST00000544504 CACNG1Q06432 222 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 CNTN1Q12860 1018 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 CDKN3Q16667 212 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 KRT71Q3SY84 523 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 FASTKD1Q53R41 847 aaKnown RBP9.48□□□□□ -0.89
YBX3-215ENST00000544504 HSP90AA5PQ58FG0 334 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 CEP85LQ5SZL2 805 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 LRRC66Q68CR7 880 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 KIAA1211LQ6NV74 962 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 CES3Q6UWW8 571 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 CERS6Q6ZMG9 384 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 ZNF765Q7L2R6 523 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 CYP2U1Q7Z449 544 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 MTERF4Q7Z6M4 381 aaKnown RBP9.48□□□□□ -0.89
YBX3-215ENST00000544504 GALNT7Q86SF2 657 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 CNTN4Q8IWV2 1026 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 HDDC3Q8N4P3 179 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 OTUD6BQ8N6M0 293 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 PPM1NQ8N819 430 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 OR13J1Q8NGT2 312 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 GPR150Q8NGU9 434 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 OR4L1Q8NH43 312 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 UHMK1Q8TAS1 419 aaKnown RBP9.48□□□□□ -0.89
YBX3-215ENST00000544504 CXorf40AQ8TE69 158 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 FAM131CQ96AQ9 280 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 ULK4Q96C45 1275 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 MTBPQ96DY7 904 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 ZNF778Q96MU6 729 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 C1QTNF7Q9BXJ2 289 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 MKRN2Q9H000 416 aaKnown RBP9.48□□□□□ -0.89
YBX3-215ENST00000544504 PREBQ9HCU5 417 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 MED4Q9NPJ6 270 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 CATSPERZQ9NTU4 200 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 ZNF446Q9NWS9 450 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 FBXL12Q9NXK8 326 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 PSMC3IPQ9P2W1 217 aaPredicted RBP9.48□□□□□ -0.89
YBX3-215ENST00000544504 CORO1CQ9ULV4 474 aaPredicted RBP9.48□□□□□ -0.89
YBX3-215ENST00000544504 NFS1Q9Y697 457 aa9.48□□□□□ -0.89
YBX3-215ENST00000544504 GLYATL1P3A0A0U1RQE8 302 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 IQANK1A0A1B0GTG1 560 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 TCRBV21S2A2A0A5A6 115 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 TLDC2A0PJX2 215 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 CCDC78A2IDD5 438 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 CCDC162PA2VCL2 907 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 GOLGA8CPA6NN73 597 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 CDX4O14627 284 aaPredicted RBP9.47□□□□□ -0.89
YBX3-215ENST00000544504 WNT9AO14904 365 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 CD3EAPO15446 510 aaKnown RBP9.47□□□□□ -0.89
YBX3-215ENST00000544504 RGS16O15492 202 aaPredicted RBP9.47□□□□□ -0.89
YBX3-215ENST00000544504 LZTS3O60299 673 aaPredicted RBP9.47□□□□□ -0.89
YBX3-215ENST00000544504 ZNF217O75362 1048 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 RNASEH2AO75792 299 aaKnown RBP9.47□□□□□ -0.89
YBX3-215ENST00000544504 TRIM16O95361 564 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 ERVK-10P10266 1014 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 OXTRP30559 389 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 SPRP35270 261 aaPredicted RBP9.47□□□□□ -0.89
YBX3-215ENST00000544504 DRD3P35462 400 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 POLD2P49005 469 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 SPINT3P49223 89 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 ZNF844Q08AG5 666 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 DNAJC3Q13217 504 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 ITGA9Q13797 1035 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 ACOX1Q15067 660 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 ZNF284Q2VY69 593 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 POM121L1PQ3SYA9 428 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 PIP5KL1Q5T9C9 394 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 TEDDM1Q5T9Z0 273 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 GRTP1Q5TC63 336 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 ZNF470Q6ECI4 717 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 KIAA1161Q6NSJ0 714 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 TRMT10BQ6PF06 316 aaKnown RBP9.47□□□□□ -0.89
YBX3-215ENST00000544504 ADGRD1Q6QNK2 874 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 KIAA1324Q6UXG2 1013 aaKnown RBP9.47□□□□□ -0.89
YBX3-215ENST00000544504 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP9.47□□□□□ -0.89
YBX3-215ENST00000544504 LIPIQ6XZB0 460 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 NLRP8Q86W28 1048 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 DEFB124Q8NES8 71 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 TSTD1Q8NFU3 115 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 OR13C4Q8NGS5 318 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 HEXDCQ8WVB3 486 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 SLC44A1Q8WWI5 657 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 PGM2Q96G03 612 aa9.47□□□□□ -0.89
YBX3-215ENST00000544504 MRGPRX1Q96LB2 322 aa9.47□□□□□ -0.89
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms