RNA–Protein interactions for RNA: ENST00000543710.5

VPS13D-211, Transcript of vacuolar protein sorting 13 homolog D, humanhuman

TSL 1 (best)

Gene VPS13D, Length 5,676 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS13D-211ENST00000543710 TRMUO75648 421 aaKnown RBP7.79□□□□□ -1.16
VPS13D-211ENST00000543710 C8AP07357 584 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 EPB42P16452 691 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 PTDSS1P48651 473 aaKnown RBP7.79□□□□□ -1.16
VPS13D-211ENST00000543710 CASP4P49662 377 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 PLK1P53350 603 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 NOMO3P69849 1222 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 MVKQ03426 396 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 FOLH1Q04609 750 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 ADIGQ0VDE8 80 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 SHROOM1Q2M3G4 852 aaPredicted RBP7.79□□□□□ -1.16
VPS13D-211ENST00000543710 ZNF57Q68EA5 555 aaPredicted RBP7.79□□□□□ -1.16
VPS13D-211ENST00000543710 KLHL17Q6TDP4 642 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 PTAR1Q7Z6K3 402 aaPredicted RBP7.79□□□□□ -1.16
VPS13D-211ENST00000543710 TRABD2AQ86V40 505 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 CELF5Q8N6W0 485 aaKnown RBP7.79□□□□□ -1.16
VPS13D-211ENST00000543710 POF1BQ8WVV4 589 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 ATG4AQ8WYN0 398 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 TLCD1Q96CP7 247 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 CDRT15Q96T59 188 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 DUSP16Q9BY84 665 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 TTYH1Q9H313 450 aaPredicted RBP7.79□□□□□ -1.16
VPS13D-211ENST00000543710 RHOJQ9H4E5 214 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 OSGEPQ9NPF4 335 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 CCDC59Q9P031 241 aaKnown RBP7.79□□□□□ -1.16
VPS13D-211ENST00000543710 C8GP07360 202 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 PRPS2P11908 318 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 ATP6V1B1P15313 513 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 PTPN1P18031 435 aaKnown RBP7.79□□□□□ -1.16
VPS13D-211ENST00000543710 PROZP22891 400 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 GRIA2P42262 883 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 ABL2P42684 1182 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 HCAR3P49019 387 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 GMFBP60983 142 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 MRPS22P82650 360 aaKnown RBP7.79□□□□□ -1.16
VPS13D-211ENST00000543710 SLC25A52Q3SY17 297 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 C10orf53Q8N6V4 93 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 SLC22A17Q8WUG5 538 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 RFKQ969G6 155 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 FBXL18Q96ME1 805 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 EVA1AQ9H8M9 152 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 IL1RAPQ9NPH3 570 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 TBCCD1Q9NVR7 557 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 UBAP1Q9NZ09 502 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 MAST2Q6P0Q8 1798 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 AZIN1O14977 448 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 TSPAN1O60635 241 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 CCNE2O96020 404 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 ITGA2BP08514 1039 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 MATKP42679 507 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 GRM2Q14416 872 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 C5orf22Q49AR2 442 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 SCLYQ96I15 445 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 ATP13A1Q9HD20 1204 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 IL17RBQ9NRM6 502 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 FKBP14Q9NWM8 211 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 PLLPQ9Y342 182 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 SIT1Q9Y3P8 196 aa7.79□□□□□ -1.16
VPS13D-211ENST00000543710 ANKDD1BA6NHY2 528 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 GABRDO14764 452 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 IFNA16P05015 189 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 UROSP10746 265 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 ACO1P21399 889 aaKnown RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 ERP29P30040 261 aaKnown RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 GRIA4P48058 902 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 EIF5AP63241 154 aaKnown RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 BTKQ06187 659 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 BNIP1Q12981 228 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 LRRC36Q1X8D7 754 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 HKDC1Q2TB90 917 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 PLEKHG6Q3KR16 790 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 CBWD3Q5JTY5 395 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 CBWD5Q5RIA9 395 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 ZNF470Q6ECI4 717 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 TPRG1Q6ZUI0 275 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 GKN2Q86XP6 184 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 MIB1Q86YT6 1006 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 GPALPP1Q8IXQ4 340 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 TRPV1Q8NER1 839 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 DBF4BQ8NFT6 615 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 METTL6Q8TCB7 284 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 C17orf62Q9BQA9 187 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 BCL7BQ9BQE9 202 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 PCDH18Q9HCL0 1135 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 H0YJX3 145 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 GRM6O15303 877 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 RGS5O15539 181 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 IDH3BO43837 385 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 IL1BP01584 269 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 JCHAINP01591 159 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 ASLP04424 464 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 FABP3P05413 133 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 EFEMP1Q12805 493 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 SEMA3AQ14563 771 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 SMCO1Q147U7 214 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 PHF19Q5T6S3 580 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 FAAH2Q6GMR7 532 aa7.78□□□□□ -1.16
VPS13D-211ENST00000543710 RAB11FIP1Q6WKZ4 1283 aaPredicted RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 SRFBP1Q8NEF9 429 aaKnown RBP7.78□□□□□ -1.16
VPS13D-211ENST00000543710 ADAMTS19Q8TE59 1207 aa7.78□□□□□ -1.16
Retrieved 100 of 20,778 RNA–protein pairs in 16.3 ms