RNA–Protein interactions for RNA: ENST00000542001.5

VARS2-212, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VARS2, Length 4,064 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-212ENST00000542001 IDH2P48735 452 aaKnown RBP16.03■□□□□ 0.16
VARS2-212ENST00000542001 TTPAP49638 278 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 AGTR2P50052 363 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 DIO3P55073 304 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 AFTPHQ6ULP2 937 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 APOLD1Q96LR9 279 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 TDRKHQ9Y2W6 561 aaKnown RBP16.03■□□□□ 0.16
VARS2-212ENST00000542001 F5P12259 2224 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 TMEM247A6NEH6 219 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 RGS5O15539 181 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 JUNP05412 331 aaKnown RBP16.03■□□□□ 0.16
VARS2-212ENST00000542001 SLC35E2BP0CK96 405 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 MAGP20916 626 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 GHRHRQ02643 423 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 SIM2Q14190 667 aaPredicted RBP16.03■□□□□ 0.16
VARS2-212ENST00000542001 IPPKQ9H8X2 491 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 FADS3Q9Y5Q0 445 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 CCND3P30281 292 aaPredicted RBP16.03■□□□□ 0.16
VARS2-212ENST00000542001 INPP1P49441 399 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 GLYATQ6IB77 296 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 DEFB118Q96PH6 123 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 TCF12Q99081 682 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 FAM192AQ9GZU8 254 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 ETAA1Q9NY74 926 aa16.03■□□□□ 0.16
VARS2-212ENST00000542001 COL16A1Q07092 1604 aaPredicted RBP16.02■□□□□ 0.16
VARS2-212ENST00000542001 TCRBV5S1A1TA0A578 114 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 FAM189A1O60320 539 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 PERM1Q5SV97 790 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 SMYD5Q6GMV2 418 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 SYT12Q8IV01 421 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 CPSF7Q8N684 471 aaKnown RBP16.02■□□□□ 0.16
VARS2-212ENST00000542001 VPS37AQ8NEZ2 397 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 KHSRPQ92945 711 aaKnown RBP eCLIP16.02■□□□□ 0.16
VARS2-212ENST00000542001 OR52E6Q96RD3 313 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 FLRT1Q9NZU1 646 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 LEF1Q9UJU2 399 aaPredicted RBP16.02■□□□□ 0.16
VARS2-212ENST00000542001 LINGO3P0C6S8 592 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 KIAA0930Q6ICG6 404 aaPredicted RBP16.02■□□□□ 0.16
VARS2-212ENST00000542001 RRM2BQ7LG56 351 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 ZNF366Q8N895 744 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 CD99L2Q8TCZ2 262 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 CDKN2AIPNLQ96HQ2 116 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 C2orf49Q9BVC5 232 aaPredicted RBP16.02■□□□□ 0.16
VARS2-212ENST00000542001 PRDM16Q9HAZ2 1276 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 SCN3BQ9NY72 215 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 PGAP2Q9UHJ9 254 aa16.02■□□□□ 0.16
VARS2-212ENST00000542001 OR2AG2A6NM03 316 aa16.02■□□□□ 0.15
VARS2-212ENST00000542001 PRMT5O14744 637 aaPredicted RBP16.02■□□□□ 0.15
VARS2-212ENST00000542001 AHCYL1O43865 530 aa16.02■□□□□ 0.15
VARS2-212ENST00000542001 GJB3O75712 270 aa16.02■□□□□ 0.15
VARS2-212ENST00000542001 ZNF37AP17032 561 aaPredicted RBP16.02■□□□□ 0.15
VARS2-212ENST00000542001 KPNA1P52294 538 aaPredicted RBP16.02■□□□□ 0.15
VARS2-212ENST00000542001 UNC93B1Q9H1C4 597 aa16.02■□□□□ 0.15
VARS2-212ENST00000542001 SCAMP1O15126 338 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 PRAMEF1O95521 474 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 CST1P01037 141 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 COL6A2P12110 1019 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 CYP4F2P78329 520 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 CYP4F3Q08477 520 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 MADCAM1Q13477 382 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 CEACAM7Q14002 265 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ACAP2Q15057 778 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ZNF284Q2VY69 593 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 CNPY1Q3B7I2 92 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ARHGAP22Q7Z5H3 698 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 TRAPPC5Q8IUR0 188 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ZMIZ2Q8NF64 920 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 OSCP1Q8WVF1 389 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ELMO1Q92556 727 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 FEM1CQ96JP0 617 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 A0A087WXM4 84 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 A0A0U1RQF3 1178 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 PPP6CO00743 305 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ACSL4O60488 711 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ADARP55265 1226 aaKnown RBP16.01■□□□□ 0.15
VARS2-212ENST00000542001 KCTD13Q8WZ19 329 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 IGSF8Q969P0 613 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 TMEM159Q96B96 161 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 OLFM1Q99784 485 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 RASSF1Q9NS23 344 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 EXD2Q9NVH0 621 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 PCDH10Q9P2E7 1040 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ECM29Q5VYK3 1845 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ADCY6O43306 1168 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 KDM1AO60341 852 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 OR1I1O60431 355 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 GLDCP23378 1020 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ACSM2AQ08AH3 577 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ACOX1Q15067 660 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ACSM2BQ68CK6 577 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 DDHD1Q8NEL9 900 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 OR10A6Q8NH74 314 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 DOLKQ9UPQ8 538 aa16.01■□□□□ 0.15
VARS2-212ENST00000542001 ZCWPW2A0A1B0GU75 182 aa16■□□□□ 0.15
VARS2-212ENST00000542001 SEPT4O43236 478 aa16■□□□□ 0.15
VARS2-212ENST00000542001 BCL10O95999 233 aa16■□□□□ 0.15
VARS2-212ENST00000542001 RAP1GDS1P52306 607 aa16■□□□□ 0.15
VARS2-212ENST00000542001 NR1H2P55055 460 aa16■□□□□ 0.15
VARS2-212ENST00000542001 ADGRE1Q14246 886 aa16■□□□□ 0.15
VARS2-212ENST00000542001 TRIM16LQ309B1 348 aa16■□□□□ 0.15
Retrieved 100 of 20,778 RNA–protein pairs in 57.9 ms