RNA–Protein interactions for RNA: ENST00000540428.1

CBX3P4-202, Transcript of chromobox 3 pseudogene 4, humanhuman

TSL 2 BASIC

Gene CBX3P4, Length 423 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CBX3P4-202ENST00000540428 TSGA13Q96PP4 275 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 AGAP2Q99490 1192 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 HERPUD2Q9BSE4 406 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 RIOK2Q9BVS4 552 aaKnown RBP11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 LDHAL6BQ9BYZ2 381 aaPredicted RBP11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 TRIT1Q9H3H1 467 aaKnown RBP11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 EPB41L1Q9H4G0 881 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 FBXO8Q9NRD0 319 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 ANAPC7Q9UJX3 599 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 TLN1Q9Y490 2541 aaKnown RBP11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 SDK2Q58EX2 2172 aa11.91□□□□□ -0.5
CBX3P4-202ENST00000540428 A6NCN8 305 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 OR5K4A6NMS3 321 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 CYSRT1A8MQ03 144 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 INPP4BO15327 924 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 MFSD11O43934 449 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 CLDN7O95471 211 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 ASMTLO95671 621 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 EML2O95834 649 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 PRLP01236 227 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 ARSEP51690 589 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 DSC2Q02487 901 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 TLE1Q04724 770 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 ABHD18Q0P651 414 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 IFI16Q16666 785 aaKnown RBP11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 HADHQ16836 314 aaKnown RBP11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 CRTC2Q53ET0 693 aaPredicted RBP11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 NCBP2-AS2Q69YL0 99 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 SLC9B2Q86UD5 537 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 ARRDC2Q8TBH0 407 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 KIAA1143Q96AT1 154 aaPredicted RBP11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 SMIM14Q96QK8 99 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 ZNF670Q9BS34 389 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 THAP2Q9H0W7 228 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 PCDH9Q9HC56 1237 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 RBM22Q9NW64 420 aaKnown RBP eCLIP11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 PKD2L2Q9NZM6 624 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 TBC1D29Q9UFV1 150 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 ZNHIT2Q9UHR6 403 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 CNOT6Q9ULM6 557 aaKnown RBP11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 CHKBQ9Y259 395 aa11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 TMEM184BQ9Y519 407 aaPredicted RBP11.9□□□□□ -0.5
CBX3P4-202ENST00000540428 BSNQ9UPA5 3926 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 TRBV23OR9-2A0A075B6M9 112 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 KIR2DS5A0A0G2JLQ3 304 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 A0A0G2JNG1 304 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 KIR2DS3K7RE56 304 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 MYO1FO00160 1098 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 CYP1A2P05177 515 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 F3P13726 295 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 MX2P20592 715 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 SPINT3P49223 89 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 PPM1FP49593 454 aaPredicted RBP11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 CLCNKAP51800 687 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 MC1RQ01726 317 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 MMRN1Q13201 1228 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 DPYSL3Q14195 570 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 MAP7Q14244 749 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 IHHQ14623 411 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 KIR2DS5Q14953 304 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 ANO6Q4KMQ2 910 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 TDRD12Q587J7 1177 aaKnown RBP11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 ANKRD20A8PQ5CZ79 823 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 HENMT1Q5T8I9 393 aaKnown RBP11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 HGSNATQ68CP4 663 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 CHST15Q7LFX5 561 aaPredicted RBP11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 LYSMD3Q7Z3D4 306 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 ZNF761Q86XN6 746 aaPredicted RBP11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 NCSTNQ92542 709 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 SYN2Q92777 582 aaPredicted RBP11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 BTBD6Q96KE9 485 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 WDR24Q96S15 920 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 NUP85Q9BW27 656 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 CARD9Q9H257 536 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 FAM83DQ9H4H8 585 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 GPN2Q9H9Y4 310 aaPredicted RBP11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 UCK1Q9HA47 277 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 ANAPC2Q9UJX6 822 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 PCYT1BQ9Y5K3 369 aaPredicted RBP11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 OAS3Q9Y6K5 1087 aaKnown RBP11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 BOD1L1Q8NFC6 3051 aa11.89□□□□□ -0.51
CBX3P4-202ENST00000540428 C1orf232A0A0U1RR37 186 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 A0A1W2PQJ5 194 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 LILRA5A6NI73 299 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 A8MU76 341 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 ANKRD66B4E2M5 251 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 GPR89AB7ZAQ6 455 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 NUAK1O60285 661 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 STK17BO94768 372 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 ATP1A1P05023 1023 aaKnown RBP11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 CD48P09326 243 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 ANKRD34CP0C6C1 535 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 GPR89BP0CG08 455 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 CDC20Q12834 499 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 NFATC2Q13469 925 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 NR1I3Q14994 352 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 PDK2Q15119 407 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 SNAP47Q5SQN1 464 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 PHYKPLQ8IUZ5 450 aa11.88□□□□□ -0.51
CBX3P4-202ENST00000540428 LPCAT1Q8NF37 534 aa11.88□□□□□ -0.51
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms