RNA–Protein interactions for RNA: ENST00000539721.5

TRAF3-204, Transcript of TNF receptor associated factor 3, humanhuman

TSL 2 BASIC

Gene TRAF3, Length 1,786 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRAF3-204ENST00000539721 PPARGP37231 505 aaPredicted RBP16.06■□□□□ 0.16
TRAF3-204ENST00000539721 DGKEP52429 567 aa16.06■□□□□ 0.16
TRAF3-204ENST00000539721 PPP2R2AP63151 447 aa16.06■□□□□ 0.16
TRAF3-204ENST00000539721 ILF2Q12905 390 aaKnown RBP16.06■□□□□ 0.16
TRAF3-204ENST00000539721 FZD5Q13467 585 aa16.06■□□□□ 0.16
TRAF3-204ENST00000539721 ZNF284Q2VY69 593 aa16.06■□□□□ 0.16
TRAF3-204ENST00000539721 LYPLAL1Q5VWZ2 237 aa16.06■□□□□ 0.16
TRAF3-204ENST00000539721 KBTBD6Q86V97 674 aa16.06■□□□□ 0.16
TRAF3-204ENST00000539721 SERPINA9Q86WD7 417 aa16.06■□□□□ 0.16
TRAF3-204ENST00000539721 HMGB4Q8WW32 186 aa16.06■□□□□ 0.16
TRAF3-204ENST00000539721 FAM131CQ96AQ9 280 aa16.06■□□□□ 0.16
TRAF3-204ENST00000539721 NUS1Q96E22 293 aa16.06■□□□□ 0.16
TRAF3-204ENST00000539721 RIOK2Q9BVS4 552 aaKnown RBP16.06■□□□□ 0.16
TRAF3-204ENST00000539721 ABCG8Q9H221 673 aa16.06■□□□□ 0.16
TRAF3-204ENST00000539721 COL6A3P12111 3177 aa16.06■□□□□ 0.16
TRAF3-204ENST00000539721 TRBV5-4A0A0C4DH59 114 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 POLR3GO15318 223 aaPredicted RBP16.05■□□□□ 0.16
TRAF3-204ENST00000539721 PLRG1O43660 514 aaKnown RBP16.05■□□□□ 0.16
TRAF3-204ENST00000539721 RECQL5O94762 991 aaPredicted RBP16.05■□□□□ 0.16
TRAF3-204ENST00000539721 ALDOAP04075 364 aaKnown RBP16.05■□□□□ 0.16
TRAF3-204ENST00000539721 C7P10643 843 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 TYK2P29597 1187 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 CA5AP35218 305 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 USP10Q14694 798 aaKnown RBP16.05■□□□□ 0.16
TRAF3-204ENST00000539721 DBN1Q16643 649 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 ATP13A5Q4VNC0 1218 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 RBM20Q5T481 1227 aaKnown RBP16.05■□□□□ 0.16
TRAF3-204ENST00000539721 USP30Q70CQ3 517 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 CYP2U1Q7Z449 544 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 SLC41A1Q8IVJ1 513 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 TRAM1L1Q8N609 369 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 ACVR1CQ8NER5 493 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 OR14C36Q8NHC7 312 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 LPGAT1Q92604 370 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 ULK4Q96C45 1275 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 AP2M1Q96CW1 435 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 NDNQ99608 321 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 CAB39LQ9H9S4 337 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 KCNK9Q9NPC2 374 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 CD320Q9NPF0 282 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 SNX15Q9NRS6 342 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 FZD4Q9ULV1 537 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 CORO1CQ9ULV4 474 aaPredicted RBP16.05■□□□□ 0.16
TRAF3-204ENST00000539721 SPAG7O75391 227 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 ACRV1P26436 265 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 PTGER3P43115 390 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 POLD2P49005 469 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 SLC12A2P55011 1212 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 GAS6Q14393 721 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 HENMT1Q5T8I9 393 aaKnown RBP16.05■□□□□ 0.16
TRAF3-204ENST00000539721 CMC1Q7Z7K0 106 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 NXPE1Q8N323 547 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 PGBD3Q8N328 593 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 ARFGAP2Q8N6H7 521 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 DTX3LQ8TDB6 740 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 ISL2Q96A47 359 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 ZSCAN5AQ9BUG6 496 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 CCDC68Q9H2F9 335 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 PCMTD2Q9NV79 361 aa16.05■□□□□ 0.16
TRAF3-204ENST00000539721 AGAP14A8MT82 685 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 OR1I1O60431 355 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 TM7SF2O76062 418 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 FMO4P31512 558 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 CCNFP41002 786 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 ADPRHP54922 357 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 POU4F1Q01851 419 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 CREB5Q02930 508 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 PPARDQ03181 441 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 SLC18A2Q05940 514 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 HECTD2Q5U5R9 776 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 FAM45BPQ6NSW5 357 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 ZNF765Q7L2R6 523 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 FAM124AQ86V42 546 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 PJA1Q8NG27 643 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 FAM45AQ8TCE6 357 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 ACMSDQ8TDX5 336 aa16.04■□□□□ 0.16
TRAF3-204ENST00000539721 ALKBH8Q96BT7 664 aaKnown RBP16.04■□□□□ 0.16
TRAF3-204ENST00000539721 TRPM6Q9BX84 2022 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 PRR23AA6NEV1 266 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 IGLON5A6NGN9 336 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 STMN1P16949 149 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 ZNF7P17097 686 aaPredicted RBP16.03■□□□□ 0.16
TRAF3-204ENST00000539721 MAGEA12P43365 314 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 ATP1A2P50993 1020 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 ZXDAP98168 799 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 SETMARQ53H47 684 aaPredicted RBP16.03■□□□□ 0.16
TRAF3-204ENST00000539721 ZNF549Q6P9A3 640 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 KDM7AQ6ZMT4 941 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 SH2D5Q6ZV89 423 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 RAPH1Q70E73 1250 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 RBFAQ8N0V3 343 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 TSTD1Q8NFU3 115 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 TSPAN17Q96FV3 270 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 AARSD1Q9BTE6 412 aaKnown RBP16.03■□□□□ 0.16
TRAF3-204ENST00000539721 OSBPL6Q9BZF3 934 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 VPS11Q9H270 941 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 SSU72Q9NP77 194 aaKnown RBP16.03■□□□□ 0.16
TRAF3-204ENST00000539721 C2orf42Q9NWW7 574 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 ZDHHC3Q9NYG2 299 aa16.03■□□□□ 0.16
TRAF3-204ENST00000539721 SMG5Q9UPR3 1016 aaKnown RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 26.9 ms