RNA–Protein interactions for RNA: ENST00000539194.5

PROM1-219, Transcript of prominin 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene PROM1, Length 3,884 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PROM1-219ENST00000539194 PDCD4Q53EL6 469 aaKnown RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 PITRM1Q5JRX3 1037 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 ACBD5Q5T8D3 534 aaPredicted RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 UGT3A1Q6NUS8 523 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 TBPL2Q6SJ96 375 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 ZNF280BQ86YH2 543 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 BTN2A3PQ96KV6 586 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 TCF12Q99081 682 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 MTG1Q9BT17 334 aaPredicted RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 C8orf4Q9NR00 106 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 HEBP1Q9NRV9 189 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 SLAMF8Q9P0V8 285 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 CPA4Q9UI42 421 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 G3BP2Q9UN86 482 aaKnown RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 A0A0J9YVX5 310 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 GAPDHSO14556 408 aaPredicted RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 ARPC2O15144 300 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 CD3EAPO15446 510 aaKnown RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 CFLARO15519 480 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 TIPRLO75663 272 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 B3GAT3O94766 335 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 POMCP01189 267 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 RPLP2P05387 115 aaKnown RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 HLA-DPA1P20036 260 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 CHRM3P20309 590 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 SAT1P21673 171 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 SLC6A4P31645 630 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 ACVRL1P37023 503 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 RGRP47804 291 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 MAPKAPK2P49137 400 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 GPNMBQ14956 572 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 MARC1Q5VT66 337 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 PRMT9Q6P2P2 845 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 IYDQ6PHW0 289 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 RSPO2Q6UXX9 243 aaPredicted RBP6.9□□□□□ -1.3
PROM1-219ENST00000539194 SYVN1Q86TM6 617 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 DHFR2Q86XF0 187 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 TRPV3Q8NET8 790 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 OR13C4Q8NGS5 318 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 EID2BQ96D98 161 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 NT5MQ9NPB1 228 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 NAALAD2Q9Y3Q0 740 aa6.9□□□□□ -1.3
PROM1-219ENST00000539194 TRBV5-3A0A0A0MS03 114 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 ATP6AP2A0A1C7CYW4 349 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 ARNTLO00327 626 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 AZIN1O14977 448 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 CLASP2O75122 1294 aaKnown RBP6.9□□□□□ -1.31
PROM1-219ENST00000539194 ATP6AP2O75787 350 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 FGF1P05230 155 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 OR4Q2P0C623 313 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 JUNBP17275 347 aaPredicted RBP6.9□□□□□ -1.31
PROM1-219ENST00000539194 HTR1EP28566 365 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 POLR2IP36954 125 aaKnown RBP6.9□□□□□ -1.31
PROM1-219ENST00000539194 GZMMP51124 257 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 DIO3P55073 304 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 EMX2Q04743 252 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 MYBPC3Q14896 1274 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 VPS26BQ4G0F5 336 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 GTF2IRD2BQ6EKJ0 949 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 XAF1Q6GPH4 301 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 DUS1LQ6P1R4 473 aaKnown RBP6.9□□□□□ -1.31
PROM1-219ENST00000539194 ISLR2Q6UXK2 745 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 GTF2IRD2Q86UP8 949 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 GALNT4Q8N4A0 578 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 TMEM199Q8N511 208 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 PDLIM5Q96HC4 596 aaKnown RBP6.9□□□□□ -1.31
PROM1-219ENST00000539194 C19orf43Q9BQ61 176 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 TTLL2Q9BWV7 592 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 NUSAP1Q9BXS6 441 aaKnown RBP6.9□□□□□ -1.31
PROM1-219ENST00000539194 SEZ6LQ9BYH1 1024 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 TNKS2Q9H2K2 1166 aa6.9□□□□□ -1.31
PROM1-219ENST00000539194 CLK4Q9HAZ1 481 aaKnown RBP6.9□□□□□ -1.31
PROM1-219ENST00000539194 RSL24D1Q9UHA3 163 aaKnown RBP6.9□□□□□ -1.31
PROM1-219ENST00000539194 HEMK1Q9Y5R4 338 aaPredicted RBP6.9□□□□□ -1.31
PROM1-219ENST00000539194 FZD6O60353 706 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 SLC2A3P11169 496 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 AKR1A1P14550 325 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 TSPAN8P19075 237 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 UGT1A6P19224 532 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 CLCN7P51798 805 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 ATXN3P54252 364 aaPredicted RBP6.89□□□□□ -1.31
PROM1-219ENST00000539194 YBEYP58557 167 aaPredicted RBP6.89□□□□□ -1.31
PROM1-219ENST00000539194 CLCQ05315 142 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 MERTKQ12866 999 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 LCP2Q13094 533 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 PAN2Q504Q3 1202 aaKnown RBP6.89□□□□□ -1.31
PROM1-219ENST00000539194 NXNQ6DKJ4 435 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 FAM81AQ8TBF8 368 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 CD200R1Q8TD46 325 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 TBRG4Q969Z0 631 aaKnown RBP eCLIP6.89□□□□□ -1.31
PROM1-219ENST00000539194 EME1Q96AY2 570 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 CENPNQ96H22 339 aaPredicted RBP6.89□□□□□ -1.31
PROM1-219ENST00000539194 CDKN2AIPNLQ96HQ2 116 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 CCDC115Q96NT0 180 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 RPF2Q9H7B2 306 aaKnown RBP6.89□□□□□ -1.31
PROM1-219ENST00000539194 CARS2Q9HA77 564 aaKnown RBP6.89□□□□□ -1.31
PROM1-219ENST00000539194 CD320Q9NPF0 282 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 COMMD8Q9NX08 183 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 ADA2Q9NZK5 511 aa6.89□□□□□ -1.31
PROM1-219ENST00000539194 DNMT3BQ9UBC3 853 aaKnown RBP6.89□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms