RNA–Protein interactions for RNA: ENST00000538077.2

LINC00346-201, long intergenic non-protein coding RNA 346, humanhuman

BASIC

Gene LINC00346, Length 6,265 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00346-201ENST00000538077 UAP1L1Q3KQV9 507 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 LRRC52Q8N7C0 313 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 EEF1AKMT1Q8WVE0 214 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 NARS2Q96I59 477 aaKnown RBP11.16□□□□□ -0.62
LINC00346-201ENST00000538077 AIF1LQ9BQI0 150 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 SPAG4Q9NPE6 437 aa11.16□□□□□ -0.62
LINC00346-201ENST00000538077 A8MUA0 341 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 C4BPBP20851 252 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 OMPP47874 163 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 NAE1Q13564 534 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 ADRM1Q16186 407 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 CPTPQ5TA50 214 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 LRRC55Q6ZSA7 311 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 SPPL2BQ8TCT7 592 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 ART4Q93070 314 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 APOLD1Q96LR9 279 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 CSPG4P5Q96PW8 444 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 KLHL31Q9H511 634 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 PNO1Q9NRX1 252 aaKnown RBP11.15□□□□□ -0.62
LINC00346-201ENST00000538077 MCUBQ9NWR8 336 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 SLC17A7Q9P2U7 560 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 SYNPO2Q9UMS6 1093 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 SAMHD1Q9Y3Z3 626 aaKnown RBP11.15□□□□□ -0.62
LINC00346-201ENST00000538077 ARL5AQ9Y689 179 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 TGFB1I1O43294 461 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 C2orf80Q0P641 193 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 PEX6Q13608 980 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 PARP15Q460N3 678 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 UBXN11Q5T124 520 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 CLEC6AQ6EIG7 209 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 C15orf52Q6ZUT6 534 aaKnown RBP11.15□□□□□ -0.62
LINC00346-201ENST00000538077 PTCHD4Q6ZW05 846 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 BEND5Q7L4P6 421 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 UBR7Q8N806 425 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 TTC29Q8NA56 475 aaPredicted RBP11.15□□□□□ -0.62
LINC00346-201ENST00000538077 ZNF607Q96SK3 696 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 GPR21Q99679 349 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 CHRAC1Q9NRG0 131 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 VWA7Q9Y334 891 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 LRRC72A6NJI9 287 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 GPR25O00155 361 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 DUSP11O75319 330 aaKnown RBP11.15□□□□□ -0.62
LINC00346-201ENST00000538077 UGT2B17O75795 530 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 MYBL2P10244 700 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 IL12BP29460 328 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 HNMTP50135 292 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 KRR1Q13601 381 aaKnown RBP11.15□□□□□ -0.62
LINC00346-201ENST00000538077 KCTD21Q4G0X4 260 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 PEG10Q86TG7 708 aaKnown RBP11.15□□□□□ -0.62
LINC00346-201ENST00000538077 Q8N9G6 341 aaPredicted RBP11.15□□□□□ -0.62
LINC00346-201ENST00000538077 KREMEN1Q96MU8 473 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 ACE2Q9BYF1 805 aaPredicted RBP11.15□□□□□ -0.62
LINC00346-201ENST00000538077 CDH19Q9H159 772 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 TMEM138Q9NPI0 162 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 DLG5Q8TDM6 1919 aa11.15□□□□□ -0.62
LINC00346-201ENST00000538077 PALM2-AKAP2B1ALY0 433 aaPredicted RBP11.15□□□□□ -0.63
LINC00346-201ENST00000538077 MT-CYBP00156 380 aaPredicted RBP11.15□□□□□ -0.63
LINC00346-201ENST00000538077 CMPK1P30085 196 aa11.15□□□□□ -0.63
LINC00346-201ENST00000538077 ANXA8L1Q5VT79 327 aa11.15□□□□□ -0.63
LINC00346-201ENST00000538077 FAM91A1Q658Y4 838 aa11.15□□□□□ -0.63
LINC00346-201ENST00000538077 TMEM220Q6QAJ8 160 aa11.15□□□□□ -0.63
LINC00346-201ENST00000538077 KAT2AQ92830 837 aa11.15□□□□□ -0.63
LINC00346-201ENST00000538077 SNX27Q96L92 541 aa11.15□□□□□ -0.63
LINC00346-201ENST00000538077 C3orf14Q9HBI5 128 aa11.15□□□□□ -0.63
LINC00346-201ENST00000538077 DCLK1O15075 740 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 PSMG1O95456 288 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 ICAM3P32942 547 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 CSKP41240 450 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 YAP1P46937 504 aaKnown RBP11.14□□□□□ -0.63
LINC00346-201ENST00000538077 CACNG1Q06432 222 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 PPM1JQ5JR12 505 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 WASHC2DQ5SRD0 308 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 MZT2AQ6P582 158 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 CUZD1Q86UP6 607 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 RASGRP3Q8IV61 690 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 KREMEN2Q8NCW0 462 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 LCN9Q8WX39 176 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 QKIQ96PU8 341 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC00346-201ENST00000538077 NOL11Q9H8H0 719 aaKnown RBP11.14□□□□□ -0.63
LINC00346-201ENST00000538077 ZNF222Q9UK12 451 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 PCDHGC5Q9Y5F6 944 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 PCDHA2Q9Y5H9 948 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 GRIN2DO15399 1336 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 H3BNH8 94 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 DBTP11182 482 aaKnown RBP11.14□□□□□ -0.63
LINC00346-201ENST00000538077 ZNF8P17098 575 aaPredicted RBP11.14□□□□□ -0.63
LINC00346-201ENST00000538077 ALDH4A1P30038 563 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 HSPA7P48741 367 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 CAMK1Q14012 370 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 ACAP2Q15057 778 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 MEA1Q16626 185 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 DDX59Q5T1V6 619 aaKnown RBP eCLIP11.14□□□□□ -0.63
LINC00346-201ENST00000538077 ZNF730Q6ZMV8 503 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 IQCF2Q8IXL9 164 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 OR10H5Q8NGA6 315 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 LRRC39Q96DD0 335 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 MRIQ9BWK5 157 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 RGPD2P0DJD1 1756 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 TCRBV9S1A1TA0A576 114 aa11.14□□□□□ -0.63
LINC00346-201ENST00000538077 CILPO75339 1184 aa11.14□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 20.4 ms