RNA–Protein interactions for RNA: ENST00000537824.2

CSMD1-215, Transcript of CUB and Sushi multiple domains 1, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene CSMD1, Length 13,512 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSMD1-215ENST00000537824 C11orf91Q3C1V1 193 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 RAP1GAP2Q684P5 730 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 DPY19L3Q6ZPD9 716 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TMEM17Q86X19 198 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 RIOX2Q8IUF8 465 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF518BQ9C0D4 1074 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TBC1D17Q9HA65 648 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 GMIPQ9P107 970 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 USP6P35125 1406 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 BBIP1A8MTZ0 92 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 OGTO15294 1046 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 FOXD2O60548 495 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 RFPL2O75678 378 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 MERTKQ12866 999 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 LINGO2Q7L985 606 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 CPSF7Q8N684 471 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 EXOC2Q96KP1 924 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 SPATA33Q96N06 139 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ELAC1Q9H777 363 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 DEPDC5O75140 1603 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ANKRD36CQ5JPF3 1778 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 NAV1Q8NEY1 1877 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 A0A087X0B3 334 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 L7N2F9 121 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 WRBO00258 174 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 MUSKO15146 869 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 AKAP8O43823 692 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 REM1O75628 298 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 NR3C2P08235 984 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 EVI2BP34910 448 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 MYL6P60660 151 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 FOXO4P98177 505 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 PPIL2Q13356 520 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 CDCA2Q69YH5 1023 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 CUZD1Q86UP6 607 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 CHCHD4Q8N4Q1 142 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 CSDE1O75534 798 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 HIST1H2ABP04908 130 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 GPR1P46091 355 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 THOP1P52888 689 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 CLCA4Q14CN2 919 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 FSCN1Q16658 493 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ILDR2Q71H61 639 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 HIST3H2AQ7L7L0 130 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 HIST1H2ACQ93077 130 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ITCHQ96J02 903 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 DBNDD1Q9H9R9 158 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 MTMR4Q9NYA4 1195 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 DNAJB4Q9UDY4 337 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 A0A075B6Q4 140 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 A0A0A0MRY4 1105 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF705EA8MWA4 302 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 SLC28A2O43868 658 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 GPIP06744 558 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 PVALBP20472 110 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ALDH1B1P30837 517 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TXNL4AP83876 142 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 MTAPQ13126 283 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 RBM48Q5RL73 367 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 C16orf86Q6ZW13 317 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 PIAS4Q8N2W9 510 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 PTGR2Q8N8N7 351 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 LRRN4Q8WUT4 740 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 PTCD2Q8WV60 388 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 UFD1Q92890 307 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 KAT5Q92993 513 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 SPATA13Q96N96 652 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 SSX3Q99909 188 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 IL22Q9GZX6 179 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 WDCPQ9H6R7 721 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 A0A1W2PPW3 197 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ITM2AO43736 263 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ATP6AP2O75787 350 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ITGB3P05106 788 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TXNP10599 105 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 PEPDP12955 493 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 HNRNPFP52597 415 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 TGM3Q08188 693 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 CDH17Q12864 832 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 SFT2D3Q587I9 215 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 SHQ1Q6PI26 577 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ZNF773Q6PK81 442 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 CMC1Q7Z7K0 106 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 REPS1Q96D71 796 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 PPP3R2Q96LZ3 170 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 BIRC8Q96P09 236 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 C7orf50Q9BRJ6 194 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ATXN3LQ9H3M9 355 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 GPRC5CQ9NQ84 441 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ABI2Q9NYB9 513 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 MAB21L2Q9Y586 359 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 FAM205AQ6ZU69 1335 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 OR6C74A6NCV1 312 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 GUCA1AP43080 201 aaPredicted RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ADAM15Q13444 863 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 FASTKD3Q14CZ7 662 aaKnown RBP5.64□□□□□ -1.51
CSMD1-215ENST00000537824 PLEKHG4Q58EX7 1191 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 MOB2Q70IA6 237 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 ADGRE3Q9BY15 652 aa5.64□□□□□ -1.51
CSMD1-215ENST00000537824 SEMA4BQ9NPR2 832 aaPredicted RBP5.64□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 17.8 ms