RNA–Protein interactions for RNA: ENST00000535906.1

VPS33B-202, Transcript of VPS33B, late endosome and lysosome associated, humanhuman

TSL 2 BASIC

Gene VPS33B, Length 2,420 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS33B-202ENST00000535906 STX7O15400 261 aaKnown RBP13.3□□□□□ -0.28
VPS33B-202ENST00000535906 CDK14O94921 469 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 LATS1O95835 1130 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 OLFM2O95897 454 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 ENO3P13929 434 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-202ENST00000535906 CDH18Q13634 790 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 CEACAM7Q14002 265 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 FBXO48Q5FWF7 155 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 APCDD1Q8J025 514 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 HJURPQ8NCD3 748 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-202ENST00000535906 EID2BQ96D98 161 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 GBP5Q96PP8 586 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 MRPL17Q9NRX2 175 aaKnown RBP13.3□□□□□ -0.28
VPS33B-202ENST00000535906 LTBP2Q14767 1821 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 ABHD14A-ACY1A0A1B0GW23 586 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 STX16-NPEPL1H3BU86 382 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 CDC7O00311 574 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 CFLARO15519 480 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 FZD6O60353 706 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 NIPSNAP2O75323 286 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 GFAPP14136 432 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 LAG3P18627 525 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 ME2P23368 584 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 MSX2P35548 267 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-202ENST00000535906 CYP4F8P98187 520 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 TSNQ15631 228 aaKnown RBP13.3□□□□□ -0.28
VPS33B-202ENST00000535906 GRAMD1BQ3KR37 738 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 ZRANB3Q5FWF4 1079 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 LARP4Q71RC2 724 aaKnown RBP eCLIP13.3□□□□□ -0.28
VPS33B-202ENST00000535906 GAREM2Q75VX8 874 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 TMEM126BQ8IUX1 230 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 SNX31Q8N9S9 440 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 ICA1LQ8NDH6 482 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 OR6K2Q8NGY2 324 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 STAG3L4Q8TBR4 150 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 USP13Q92995 863 aaPredicted RBP13.3□□□□□ -0.28
VPS33B-202ENST00000535906 TM6SF2Q9BZW4 377 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 PLK2Q9NYY3 685 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 DNMT3BQ9UBC3 853 aaKnown RBP13.3□□□□□ -0.28
VPS33B-202ENST00000535906 DNAJC15Q9Y5T4 150 aa13.3□□□□□ -0.28
VPS33B-202ENST00000535906 OAS3Q9Y6K5 1087 aaKnown RBP13.3□□□□□ -0.28
VPS33B-202ENST00000535906 KERAO60938 352 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 CSF2RAP15509 400 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 TTPAP49638 278 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 FOXA1P55317 472 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 PKNOX1P55347 436 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 RAD51Q06609 339 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 MMEL1Q495T6 779 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 PABPC1LQ4VXU2 614 aaKnown RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 CTSL3PQ5NE16 218 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 C1orf53Q5VUE5 145 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 CLYBLQ8N0X4 340 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 RNF148Q8N7C7 305 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 FBRSL1Q9HCM7 1045 aaKnown RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 MID1IP1Q9NPA3 183 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 UTP6Q9NYH9 597 aaKnown RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 RNF112Q9ULX5 631 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 DTNAQ9Y4J8 743 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 PTGDR2Q9Y5Y4 395 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 ANKRD12Q6UB98 2062 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 A0A1B0GTL3 188 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 TYW5A2RUC4 315 aaKnown RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 SUPT3HB4E1H0 165 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 H7C0S8 307 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 NRG2O14511 850 aaPredicted RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 SMAD6O43541 496 aaKnown RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 LILRB3O75022 631 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 CLASP2O75122 1294 aaKnown RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 SUPT3HO75486 399 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 GPC4O75487 556 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 BCAS2O75934 225 aaPredicted RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 ALPIP09923 528 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 PKMP14618 531 aaKnown RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 CTPS1P17812 591 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 GABRR2P28476 465 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 WDR5P61964 334 aaKnown RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 MRPS22P82650 360 aaKnown RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 MS4A2Q01362 244 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 GRM2Q14416 872 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 RAB44Q7Z6P3 723 aaPredicted RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 CAMK1DQ8IU85 385 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 MFN1Q8IWA4 741 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 SIDT2Q8NBJ9 832 aaKnown RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 TRPC4APQ8TEL6 797 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 ZNF483Q8TF39 744 aaPredicted RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 DLG3Q92796 817 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 FUBP1Q96AE4 644 aaKnown RBP13.29□□□□□ -0.28
VPS33B-202ENST00000535906 C19orf60Q96EN9 201 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 PIDD1Q9HB75 910 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 CCDC167Q9P0B6 97 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 IL17CQ9P0M4 197 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 CLEC4EQ9ULY5 219 aa13.29□□□□□ -0.28
VPS33B-202ENST00000535906 PSMD12O00232 456 aaPredicted RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 ECI2O75521 394 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 TSPAN12O95859 305 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 FGF4P08620 206 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 CLTBP09497 229 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 EEF1DP29692 281 aaKnown RBP13.28□□□□□ -0.28
VPS33B-202ENST00000535906 CA8P35219 290 aa13.28□□□□□ -0.28
VPS33B-202ENST00000535906 PTK2BQ14289 1009 aa13.28□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms