RNA–Protein interactions for RNA: ENST00000535005.5

SCARB1-204, Transcript of scavenger receptor class B member 1, humanhuman

TSL 1 (best)

Gene SCARB1, Length 1,845 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARB1-204ENST00000535005 PLK4O00444 970 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 TSPAN6O43657 245 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 PLRG1O43660 514 aaKnown RBP12.26□□□□□ -0.45
SCARB1-204ENST00000535005 ZNF217O75362 1048 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 PRKCGP05129 697 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 LHCGRP22888 699 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 FOXN2P32314 431 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 HMGCLP35914 325 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 ELK3P41970 407 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 MAGEA4P43358 317 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 PTDSS1P48651 473 aaKnown RBP12.26□□□□□ -0.45
SCARB1-204ENST00000535005 TPMTP51580 245 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 RPS6KA3P51812 740 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 RALGDSQ12967 914 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 MTM1Q13496 603 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 MUM1Q2TAK8 710 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 NEK5Q6P3R8 708 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 SDCCAG8Q86SQ7 713 aaPredicted RBP12.26□□□□□ -0.45
SCARB1-204ENST00000535005 TMEM135Q86UB9 458 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 TRABD2AQ86V40 505 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 LONP2Q86WA8 852 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 CACUL1Q86Y37 369 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 FBXL6Q8N531 539 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 PPHLN1Q8NEY8 458 aaKnown RBP12.26□□□□□ -0.45
SCARB1-204ENST00000535005 LRRC8CQ8TDW0 803 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 FAM136AQ96C01 138 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 FAM210AQ96ND0 272 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 WDR83Q9BRX9 315 aaKnown RBP12.26□□□□□ -0.45
SCARB1-204ENST00000535005 FAM167BQ9BTA0 163 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 ZFYVE1Q9HBF4 777 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 SAYSD1Q9NPB0 183 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 PRMT8Q9NR22 394 aaPredicted RBP12.26□□□□□ -0.45
SCARB1-204ENST00000535005 PDP2Q9P2J9 529 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 TRIM33Q9UPN9 1127 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 DYNC1LI1Q9Y6G9 523 aaKnown RBP12.26□□□□□ -0.45
SCARB1-204ENST00000535005 ZDBF2Q9HCK1 2354 aa12.26□□□□□ -0.45
SCARB1-204ENST00000535005 CCDC163A0A0D9SF12 145 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 C2orf81A6NN90 581 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 C10orf142B7Z368 130 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 TNFRSF10AO00220 468 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 PSMD11O00231 422 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 AURKAO14965 403 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 LPOP22079 712 aaPredicted RBP12.25□□□□□ -0.45
SCARB1-204ENST00000535005 OXTRP30559 389 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 STC1P52823 247 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 CRADDP78560 199 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 ACVR1Q04771 509 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 UBAP2Q5T6F2 1119 aaKnown RBP12.25□□□□□ -0.45
SCARB1-204ENST00000535005 TSTD2Q5T7W7 516 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 LYSMD3Q7Z3D4 306 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 GLT6D1Q7Z4J2 308 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 TSPAN33Q86UF1 283 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 IGDCC3Q8IVU1 814 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 SRRM1Q8IYB3 904 aaKnown RBP12.25□□□□□ -0.45
SCARB1-204ENST00000535005 PGBD3Q8N328 593 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 TMEM105Q8N8V8 129 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 GANCQ8TET4 914 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 STYXQ8WUJ0 223 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 C10orf82Q8WW14 230 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 SLC7A6OSQ96CW6 309 aaPredicted RBP12.25□□□□□ -0.45
SCARB1-204ENST00000535005 EID2BQ96D98 161 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 GPR63Q9BZJ6 419 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 EPHX3Q9H6B9 360 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 SGK2Q9HBY8 427 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 SPATA6Q9NWH7 488 aaPredicted RBP12.25□□□□□ -0.45
SCARB1-204ENST00000535005 IL17CQ9P0M4 197 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 C1orf232A0A0U1RR37 186 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 RGSL1A5PLK6 1076 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 CCDC22O60826 627 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 BANF1O75531 89 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 CLDN7O95471 211 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 TROVE2P10155 538 aaKnown RBP eCLIP12.25□□□□□ -0.45
SCARB1-204ENST00000535005 TSHRP16473 764 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 PGAM1P18669 254 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 ZNF140P52738 457 aaPredicted RBP12.25□□□□□ -0.45
SCARB1-204ENST00000535005 CREB5Q02930 508 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 PTSQ03393 145 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 KPNB1Q14974 876 aaKnown RBP12.25□□□□□ -0.45
SCARB1-204ENST00000535005 FASTKD3Q14CZ7 662 aaKnown RBP12.25□□□□□ -0.45
SCARB1-204ENST00000535005 CNGA3Q16281 694 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 KYNUQ16719 465 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 LRRC73Q5JTD7 316 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 STEAP4Q687X5 459 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 LRRC66Q68CR7 880 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 CASC4Q6P4E1 433 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 LIPIQ6XZB0 460 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 ZBED8Q8IZ13 594 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 ARHGAP24Q8N264 748 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 FBXO36Q8NEA4 188 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 PYROXD1Q8WU10 500 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 NR1H4Q96RI1 486 aaPredicted RBP12.25□□□□□ -0.45
SCARB1-204ENST00000535005 PREBQ9HCU5 417 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 CHRAC1Q9NRG0 131 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 TREX1Q9NSU2 369 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 SLC24A2Q9UI40 661 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 ARL5AQ9Y689 179 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 MAD1L1Q9Y6D9 718 aa12.25□□□□□ -0.45
SCARB1-204ENST00000535005 USP1O94782 785 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 POLBP06746 335 aa12.24□□□□□ -0.45
SCARB1-204ENST00000535005 TDGF1P13385 188 aa12.24□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 23.9 ms