RNA–Protein interactions for RNA: ENST00000532331.5

PTPRK-221, Transcript of protein tyrosine phosphatase, receptor type K, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene PTPRK, Length 5,757 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRK-221ENST00000532331 ACTR1AP61163 376 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 ATP13A5Q4VNC0 1218 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 TMEM220Q6QAJ8 160 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 CMTM8Q8IZV2 173 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 ZBED3Q96IU2 234 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-221ENST00000532331 CARS2Q9HA77 564 aaKnown RBP11.25□□□□□ -0.61
PTPRK-221ENST00000532331 PSMD13Q9UNM6 376 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 RGPD5Q99666 1765 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 LTBP4Q8N2S1 1624 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 C2CD4BA6NLJ0 364 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 B4DGG1 531 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 PEX11AO75192 247 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 PKMP14618 531 aaKnown RBP11.25□□□□□ -0.61
PTPRK-221ENST00000532331 CRATP43155 626 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 CERCAMQ5T4B2 595 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 GATAD2AQ86YP4 633 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 ZDHHC13Q8IUH4 622 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 EPHX4Q8IUS5 362 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 TCAIMQ8N3R3 496 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 DEFB119Q8N690 84 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 CLEC4CQ8WTT0 213 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 ANKRD49Q8WVL7 239 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 DLG3Q92796 817 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 HERC2P3Q9BVR0 1158 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 SUV39H2Q9H5I1 410 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 RGPD2P0DJD1 1756 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 ILVBLA1L0T0 632 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 LRRC14BA6NHZ5 514 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 WNT9AO14904 365 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 KLF8O95600 359 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-221ENST00000532331 TALDO1P37837 337 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 FEN1P39748 380 aaKnown RBP11.25□□□□□ -0.61
PTPRK-221ENST00000532331 SSR2P43308 183 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 HK2P52789 917 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 STX4Q12846 297 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 GPRIN3Q6ZVF9 776 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 ACE2Q9BYF1 805 aaPredicted RBP11.25□□□□□ -0.61
PTPRK-221ENST00000532331 REEP1Q9H902 201 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 MRTO4Q9UKD2 239 aaKnown RBP11.25□□□□□ -0.61
PTPRK-221ENST00000532331 VWA7Q9Y334 891 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 TPRKBQ9Y3C4 175 aa11.25□□□□□ -0.61
PTPRK-221ENST00000532331 ZNF623O75123 536 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 DLGAP3O95886 979 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 GBE1Q04446 702 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 TRIM16LQ309B1 348 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 TTMPQ5BVD1 217 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 LY6G5CQ5SRR4 150 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 OR52K2Q8NGK3 314 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 HIC2Q96JB3 615 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 RIBC2Q9H4K1 309 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 ANAPC2Q9UJX6 822 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 ALOX15BO15296 676 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 BIRC5O15392 142 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 CFHP08603 1231 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 MAGEA10P43363 369 aaPredicted RBP11.24□□□□□ -0.61
PTPRK-221ENST00000532331 TAF5Q15542 800 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 UPP1Q16831 310 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 LRRC73Q5JTD7 316 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 CCDC103Q8IW40 242 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 SCAIQ8N9R8 606 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 QKIQ96PU8 341 aaKnown RBP eCLIP11.24□□□□□ -0.615e-7■■■■■ 27.3
PTPRK-221ENST00000532331 PRRG4Q9BZD6 226 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 HMGXB4Q9UGU5 601 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 LEF1Q9UJU2 399 aaPredicted RBP11.24□□□□□ -0.61
PTPRK-221ENST00000532331 EFR3BQ9Y2G0 817 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 ALS2Q96Q42 1657 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 GTPBP1O00178 669 aaKnown RBP11.24□□□□□ -0.61
PTPRK-221ENST00000532331 SASH3O75995 380 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 SNRPB2P08579 225 aaKnown RBP11.24□□□□□ -0.61
PTPRK-221ENST00000532331 NUDT17P0C025 328 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 EPORP19235 508 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 BIKQ13323 160 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 CEP78Q5JTW2 689 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 SNX30Q5VWJ9 437 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 ADHFE1Q8IWW8 467 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 PCDH20Q8N6Y1 951 aaKnown RBP11.24□□□□□ -0.61
PTPRK-221ENST00000532331 PTCD2Q8WV60 388 aaKnown RBP11.24□□□□□ -0.61
PTPRK-221ENST00000532331 RMND5BQ96G75 393 aaPredicted RBP11.24□□□□□ -0.61
PTPRK-221ENST00000532331 C8orf33Q9H7E9 229 aaPredicted RBP11.24□□□□□ -0.61
PTPRK-221ENST00000532331 RAP2CQ9Y3L5 183 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 ADH1BP00325 375 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 KCNQ1P51787 676 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 NPY5RQ15761 445 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 ARMCX4Q5H9R4 360 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 LIPMQ5VYY2 423 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 ZNF276Q8N554 614 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 PLD5Q8N7P1 536 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 SMARCD2Q92925 531 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 STMN3Q9NZ72 180 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 PPIEQ9UNP9 301 aaKnown RBP11.24□□□□□ -0.61
PTPRK-221ENST00000532331 FAM237BA0A1B0GVD1 139 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 GPR32O75388 356 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 ALDH4A1P30038 563 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 PKNOX1P55347 436 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 TSNQ15631 228 aaKnown RBP11.24□□□□□ -0.61
PTPRK-221ENST00000532331 PHF19Q5T6S3 580 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 C16orf62Q7Z3J2 963 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 IFNLR1Q8IU57 520 aaPredicted RBP11.24□□□□□ -0.61
PTPRK-221ENST00000532331 DHRSXQ8N5I4 330 aa11.24□□□□□ -0.61
PTPRK-221ENST00000532331 WDR36Q8NI36 951 aaKnown RBP11.24□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 28.8 ms