RNA–Protein interactions for RNA: ENST00000531110.5

CD44-231, Transcript of CD44 molecule (Indian blood group), humanhuman

TSL 3

Gene CD44, Length 749 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD44-231ENST00000531110 TTC39AQ5SRH9 613 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 GRTP1Q5TC63 336 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 SLC9A4Q6AI14 798 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 OLFM4Q6UX06 510 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 CCNI2Q6ZMN8 369 aaPredicted RBP5.66□□□□□ -1.5
CD44-231ENST00000531110 CYP4V2Q6ZWL3 525 aaPredicted RBP5.66□□□□□ -1.5
CD44-231ENST00000531110 ASRGL1Q7L266 308 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 CROCCP2Q86T23 111 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 COMTD1Q86VU5 262 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 ERO1BQ86YB8 467 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 TICAM1Q8IUC6 712 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 CCDC28AQ8IWP9 274 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 CLYBLQ8N0X4 340 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 CNTROBQ8N137 903 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 OR2C3Q8N628 320 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 CCDC197Q8NCU1 140 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 OR6C4Q8NGE1 309 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 GRPEL2Q8TAA5 225 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 FANK1Q8TC84 345 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 SCFD1Q8WVM8 642 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 INPP5DQ92835 1189 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 CCDC127Q96BQ5 260 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 R3HDM4Q96D70 268 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 CNDP1Q96KN2 507 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 SELENOSQ9BQE4 189 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 ZPBPQ9BS86 351 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 THAP7Q9BT49 309 aaPredicted RBP5.66□□□□□ -1.5
CD44-231ENST00000531110 TDRD1Q9BXT4 1180 aaKnown RBP5.66□□□□□ -1.5
CD44-231ENST00000531110 LHX5Q9H2C1 402 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 KLK15Q9H2R5 256 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 SNX25Q9H3E2 840 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 TAF1DQ9H5J8 278 aaPredicted RBP5.66□□□□□ -1.5
CD44-231ENST00000531110 MRM3Q9HC36 420 aaKnown RBP5.66□□□□□ -1.5
CD44-231ENST00000531110 LZTFL1Q9NQ48 299 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 TBC1D23Q9NUY8 699 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 PAG1Q9NWQ8 432 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 HPF1Q9NWY4 346 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 CYP39A1Q9NYL5 469 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP5.66□□□□□ -1.5
CD44-231ENST00000531110 ADAM22Q9P0K1 906 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 DNAJB11Q9UBS4 358 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 MALT1Q9UDY8 824 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 VPS51Q9UID3 782 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 PHTF1Q9UMS5 762 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 FAF1Q9UNN5 650 aaPredicted RBP5.66□□□□□ -1.5
CD44-231ENST00000531110 COG5Q9UP83 839 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 USP22Q9UPT9 525 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 DRG1Q9Y295 367 aaKnown RBP5.66□□□□□ -1.5
CD44-231ENST00000531110 ZNF175Q9Y473 711 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 EIF4G3O43432 1585 aaKnown RBP5.66□□□□□ -1.5
CD44-231ENST00000531110 TMEM131LA2VDJ0 1609 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 PNPLA6Q8IY17 1366 aa5.66□□□□□ -1.5
CD44-231ENST00000531110 PPRC1Q5VV67 1664 aaKnown RBP5.66□□□□□ -1.5
CD44-231ENST00000531110 RALGAPBQ86X10 1494 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 MROH2BQ7Z745 1585 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ARHGEF35A5YM69 484 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ACOD1A6NK06 481 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 TSPY2A6NKD2 308 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 TRPC5OSA6NMA1 111 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 H0Y626 953 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 TRIM77I1YAP6 450 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 RNF103O00237 685 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 CACNB4O00305 520 aaPredicted RBP5.65□□□□□ -1.5
CD44-231ENST00000531110 QSOX1O00391 747 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 IKBKBO14920 756 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 IGLV2-14P01704 120 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 S100A9P06702 114 aaKnown RBP5.65□□□□□ -1.5
CD44-231ENST00000531110 CYP3A4P08684 503 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 IFIT2P09913 472 aaKnown RBP5.65□□□□□ -1.5
CD44-231ENST00000531110 TSPY3P0CV98 308 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 TSPY8P0CW00 308 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 TPBGLP0DKB5 382 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 MYCLP12524 364 aaPredicted RBP5.65□□□□□ -1.5
CD44-231ENST00000531110 CCNB1P14635 433 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ANPEPP15144 967 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 CD19P15391 556 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 CSF2RAP15509 400 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 FBLP22087 321 aaKnown RBP5.65□□□□□ -1.5
CD44-231ENST00000531110 SLC5A2P31639 672 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 GTF2H1P32780 548 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 RFC4P35249 363 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 NUP107P57740 925 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 TSPY1Q01534 308 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 CDR2Q01850 454 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 GHRHRQ02643 423 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 BTKQ06187 659 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 MVPQ14764 893 aaKnown RBP5.65□□□□□ -1.5
CD44-231ENST00000531110 ME3Q16798 604 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 XKR3Q5GH77 459 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 TSTD2Q5T7W7 516 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ATAD3BQ5T9A4 648 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 AGBL2Q5U5Z8 902 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 PRMT9Q6P2P2 845 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 FBXO42Q6P3S6 717 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 LRRC8BQ6P9F7 803 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 PIGWQ7Z7B1 504 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ZER1Q7Z7L7 766 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 NELFCDQ8IXH7 590 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 ARHGAP24Q8N264 748 aa5.65□□□□□ -1.5
CD44-231ENST00000531110 FBXL16Q8N461 479 aa5.65□□□□□ -1.5
Retrieved 100 of 20,778 RNA–protein pairs in 42.4 ms