RNA–Protein interactions for RNA: ENST00000528930.5

SSBP3-212, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 1 (best)

Gene SSBP3, Length 862 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-212ENST00000528930 AKT2P31751 481 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 SCNN1BP51168 640 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 RENBPP51606 427 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 SUOXP51687 545 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 PDX1P52945 283 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 HADHBP55084 474 aaKnown RBP8.48□□□□□ -1.05
SSBP3-212ENST00000528930 GALNT2Q10471 571 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 SLC10A2Q12908 348 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-212ENST00000528930 DOC2BQ14184 412 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 BRAT1Q6PJG6 821 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 Q6ZSR6 202 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 LRRC49Q8IUZ0 686 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 MCEMP1Q8IX19 187 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 ATPAF2Q8N5M1 289 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 TEX26Q8N6G2 289 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 CENPTQ96BT3 561 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 LURAP1Q96LR2 239 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 RNF157Q96PX1 679 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 CALN1Q9BXU9 219 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 CASS4Q9NQ75 786 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 ERRFI1Q9UJM3 462 aaPredicted RBP8.48□□□□□ -1.05
SSBP3-212ENST00000528930 TFR2Q9UP52 801 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 U3KQA8 63 aa8.48□□□□□ -1.05
SSBP3-212ENST00000528930 FBN1P35555 2871 aaKnown RBP8.47□□□□□ -1.05
SSBP3-212ENST00000528930 ATRQ13535 2644 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 NEMP1O14524 444 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 TM7SF2O76062 418 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 MAP3K6O95382 1288 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 GIMD1P0DJR0 217 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 TGM2P21980 687 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 SERPINA4P29622 427 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 HSPA9P38646 679 aaKnown RBP8.47□□□□□ -1.05
SSBP3-212ENST00000528930 MMP12P39900 470 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 GARSP41250 739 aaKnown RBP8.47□□□□□ -1.05
SSBP3-212ENST00000528930 SLC1A1P43005 524 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 PFN3P60673 137 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 MAXP61244 160 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 AP1S1P61966 158 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 GBE1Q04446 702 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 BCL2L1Q07817 233 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 ELP6Q0PNE2 266 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 SGCGQ13326 291 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 IHHQ14623 411 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 LACTB2Q53H82 288 aaPredicted RBP8.47□□□□□ -1.05
SSBP3-212ENST00000528930 TPRG1LQ5T0D9 272 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 MARC1Q5VT66 337 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 LRRC38Q5VT99 294 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 TMEM214Q6NUQ4 689 aaKnown RBP8.47□□□□□ -1.05
SSBP3-212ENST00000528930 KYAT3Q6YP21 454 aaKnown RBP8.47□□□□□ -1.05
SSBP3-212ENST00000528930 DTX1Q86Y01 620 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 MAP7D3Q8IWC1 876 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 CCDC170Q8IYT3 715 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 SLC25A45Q8N413 288 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 PLD5Q8N7P1 536 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 TP53I13Q8NBR0 393 aaPredicted RBP8.47□□□□□ -1.05
SSBP3-212ENST00000528930 DENND6BQ8NEG7 585 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 MAPK15Q8TD08 544 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 PDCD6IPQ8WUM4 868 aaKnown RBP8.47□□□□□ -1.05
SSBP3-212ENST00000528930 MAML1Q92585 1016 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 TSGA13Q96PP4 275 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 PANX2Q96RD6 677 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 NUDCD1Q96RS6 583 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 MGME1Q9BQP7 344 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 WRAP53Q9BUR4 548 aaKnown RBP8.47□□□□□ -1.05
SSBP3-212ENST00000528930 ATP13A3Q9H7F0 1226 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 PCDH12Q9NPG4 1184 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 MBNL1Q9NR56 388 aaKnown RBP8.47□□□□□ -1.05
SSBP3-212ENST00000528930 SEPT10Q9P0V9 454 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 ITGB1BP2Q9UKP3 347 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 HYOU1Q9Y4L1 999 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 PCDHGC4Q9Y5F7 938 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 PCDHA13Q9Y5I0 950 aa8.47□□□□□ -1.05
SSBP3-212ENST00000528930 EPN1Q9Y6I3 576 aaPredicted RBP8.47□□□□□ -1.05
SSBP3-212ENST00000528930 SPTY2D1-AS1A0A0U1RR47 76 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 LOC107983988A0A1B0GUW6 1196 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-212ENST00000528930 ARHGAP10A1A4S6 786 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 LRRD1A4D1F6 860 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 CFAP69A5D8W1 941 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 PRR19A6NJB7 356 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 SOWAHDA6NJG2 315 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 A6NNZ2 444 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 ZNF487B1APH4 448 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 FPGTO14772 594 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 MATN3O15232 486 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 HTRA2O43464 458 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-212ENST00000528930 TCEA3O75764 348 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 NDUFA10O95299 355 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 DRD2P14416 443 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 GM2AP17900 193 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 COMTP21964 271 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 XPAP23025 273 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-212ENST00000528930 CCNCP24863 283 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 CYLC1P35663 651 aaPredicted RBP8.46□□□□□ -1.06
SSBP3-212ENST00000528930 IGFALSP35858 605 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 MMP13P45452 471 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 RABIFP47224 123 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 TRAF2Q12933 501 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 RALGDSQ12967 914 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 FZD2Q14332 565 aa8.46□□□□□ -1.06
SSBP3-212ENST00000528930 ZNF235Q14590 738 aa8.46□□□□□ -1.06
Retrieved 100 of 20,778 RNA–protein pairs in 22.2 ms