RNA–Protein interactions for RNA: ENST00000524652.1

CSDE1-208, Transcript of cold shock domain containing E1, humanhuman

TSL 4

Gene CSDE1, Length 562 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CSDE1-208ENST00000524652 OTUD6AQ7L8S5 288 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 TMCO2Q7Z6W1 182 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 RPAINQ86UA6 219 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 CDR2LQ86X02 465 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 SFR1Q86XK3 245 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 SPATA2LQ8IUW3 424 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 IQCF1Q8N6M8 205 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 METTL13Q8N6R0 699 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 IQUBQ8NA54 791 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 KIAA0895Q8NCT3 520 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 CCDC150Q8NCX0 1101 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 TMEM161BQ8NDZ6 487 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 OR52N4Q8NGI2 321 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 ERMNQ8TAM6 284 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 SPATA20Q8TB22 786 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 BADQ92934 168 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 EME1Q96AY2 570 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 GRAMD1AQ96CP6 724 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 CPB2Q96IY4 423 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 SF3B5Q9BWJ5 86 aaKnown RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 COLEC11Q9BWP8 271 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 POLR3FQ9H1D9 316 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 MYLK2Q9H1R3 596 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 TNMDQ9H2S6 317 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 HIPK3Q9H422 1215 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 OBP2AQ9NY56 170 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 TBC1D7Q9P0N9 293 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 SUCLA2Q9P2R7 463 aaPredicted RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 MYO1AQ9UBC5 1043 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 CORO2BQ9UQ03 480 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 GDAQ9Y2T3 454 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 OBSL1O75147 1896 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 MROH7Q68CQ1 1323 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 DENND4CQ5VZ89 1909 aa3.15□□□□□ -1.91
CSDE1-208ENST00000524652 TPRP12270 2363 aaKnown RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 GCN1Q92616 2671 aaKnown RBP3.15□□□□□ -1.91
CSDE1-208ENST00000524652 C2orf16Q68DN1 1984 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 CKAP5Q14008 2032 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 WDFY4Q6ZS81 3184 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 A0A1W2PPC4 97 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 LRRIQ4A6NIV6 560 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 ANKRD63C9JTQ0 380 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 H0YGN5 161 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 TNFRSF13BO14836 293 aaPredicted RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 MDM4O15151 490 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 SLC16A4O15374 487 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 MAGEB2O15479 319 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 FAM189A1O60320 539 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 TSPAN1O60635 241 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 VIPP01282 170 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 IFNA2P01563 188 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 CXCL10P02778 98 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 WNT1P04628 370 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 RPN1P04843 607 aaKnown RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 RFPL3SP0C7P2 107 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 CHRNB1P11230 501 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 ALADP13716 330 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 PLA2G2AP14555 144 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 DARSP14868 501 aaKnown RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 TSHRP16473 764 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 CAPN2P17655 700 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 ARF4P18085 180 aaPredicted RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 TNFRSF8P28908 595 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 HOXA11P31270 313 aaPredicted RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 RFX2P48378 723 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 PEX3P56589 373 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 ASIC1P78348 528 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 GTF2BQ00403 316 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 CBFBQ13951 182 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 EEF1AKMT2Q5JPI9 291 aaKnown RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 C9orf50Q5SZB4 431 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 FAM109BQ6ICB4 259 aaPredicted RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 LIN28BQ6ZN17 250 aaKnown RBP eCLIP3.14□□□□□ -1.911e-12■■■■□ 22.1
CSDE1-208ENST00000524652 Q6ZTC4 211 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 LRRC8DQ7L1W4 858 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 ZNF720Q7Z2F6 126 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 DEFB128Q7Z7B8 93 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 PAQR4Q8N4S7 273 aaPredicted RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 RNF152Q8N8N0 203 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 RNF149Q8NC42 400 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 CNNM3Q8NE01 707 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 MCPH1Q8NEM0 835 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 DBF4BQ8NFT6 615 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 RASSF8Q8NHQ8 419 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 SCFD1Q8WVM8 642 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 PSPC1Q8WXF1 523 aaKnown RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 TTC17Q96AE7 1141 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 TIGD1Q96MW7 591 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 EIF3CQ99613 913 aaKnown RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 GDF15Q99988 308 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 FUCA2Q9BTY2 467 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 APOL5Q9BWW9 433 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 EIF2AQ9BY44 585 aaKnown RBP3.14□□□□□ -1.91
CSDE1-208ENST00000524652 SEZ6LQ9BYH1 1024 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 NFKBIZQ9BYH8 718 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 PRO3102Q9H379 93 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 FZD8Q9H461 694 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 CUEDC2Q9H467 287 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 CLSTN2Q9H4D0 955 aa3.14□□□□□ -1.91
CSDE1-208ENST00000524652 PARVGQ9HBI0 331 aa3.14□□□□□ -1.91
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms