RNA–Protein interactions for RNA: ENST00000521340.1

HMGN1P28-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 28, humanhuman

BASIC

Gene HMGN1P28, Length 364 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P28-201ENST00000521340 CAPZA2P47755 286 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 RAD23BP54727 409 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 PPARDQ03181 441 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 ITGADQ13349 1161 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 PLCB4Q15147 1175 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 PNLIPRP3Q17RR3 467 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 Q4G0T1 1027 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 CBWD6Q4V339 395 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 CBWD3Q5JTY5 395 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 WASHC2DQ5SRD0 308 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 FAM69BQ5VUD6 431 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 METTL2BQ6P1Q9 378 aaKnown RBP3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 PLBD1Q6P4A8 553 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 FAM198BQ6UWH4 519 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZNF793Q6ZN11 406 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZNF367Q7RTV3 350 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 CCDC186Q7Z3E2 898 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 YTHDF3Q7Z739 585 aaKnown RBP3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZNF595Q8IYB9 648 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 RASGEF1CQ8N431 466 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 PI4KAP1Q8N8J0 262 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 SLC38A9Q8NBW4 561 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 CLEC18CQ8NCF0 446 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 RBM15BQ8NDT2 890 aaKnown RBP3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 CFAP61Q8NHU2 1237 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 DDB2Q92466 427 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 APBB2Q92870 758 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 RMDN1Q96DB5 314 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 METTL2AQ96IZ6 378 aaKnown RBP3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZNF570Q96NI8 536 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 PCGF1Q9BSM1 259 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 ABHD6Q9BV23 337 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 CCDC106Q9BWC9 280 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 SLCO5A1Q9H2Y9 848 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 MMP27Q9H306 513 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 KCNK15Q9H427 330 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 TASP1Q9H6P5 420 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 GPR108Q9NPR9 543 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 HAO2Q9NYQ3 351 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 CPSF2Q9P2I0 782 aaKnown RBP3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 LARSQ9P2J5 1176 aaKnown RBP3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 PADI3Q9ULW8 664 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 COG5Q9UP83 839 aa3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 SEC23IPQ9Y6Y8 1000 aaKnown RBP3.45□□□□□ -1.86
HMGN1P28-201ENST00000521340 TMEM272A0A1B0GTI8 110 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 A0A1W2PP11 408 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 HEPACAM2A8MVW5 462 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 BECN2A8MW95 431 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 FAM90A26D6RGX4 464 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 MAP2K7O14733 419 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 TIMM23O14925 209 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 MOSPD3O75425 235 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 RSL1D1O76021 490 aaKnown RBP3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 RECQL5O94762 991 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 NDUFB8O95169 186 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 KCNK5O95279 499 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 VNN2O95498 520 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 AFPP02771 609 aaKnown RBP3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 CBSLP0DN79 551 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 MYBL1P10243 752 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 VDRP11473 427 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 CYP19A1P11511 503 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 ARSBP15848 533 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 DDX5P17844 614 aaKnown RBP3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 NR2F2P24468 414 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 LMO1P25800 156 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 CBSP35520 551 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 PRCPP42785 496 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 ME1P48163 572 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZP1P60852 638 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 TMF1P82094 1093 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 GAD2Q05329 585 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 PRPF4BQ13523 1007 aaKnown RBP3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 ZNF273Q14593 569 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 SYT16Q17RD7 645 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 HYAL4Q2M3T9 481 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 DCAF6Q58WW2 860 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 KRBOX4Q5JUW0 171 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 DCAF12L2Q5VW00 463 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 SIGIRRQ6IA17 410 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 PARM1Q6UWI2 310 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 CAMKMTQ7Z624 323 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 ADGRG3Q86Y34 549 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 CAMK1DQ8IU85 385 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 ARID3BQ8IVW6 561 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 TTC30BQ8N4P2 665 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 OR6J1Q8NGC5 347 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 C16orf52Q8NHV5 167 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 TRIB2Q92519 343 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 LPGAT1Q92604 370 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 APOLD1Q96LR9 279 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 LRRC3BQ96PB8 259 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 OLFM1Q99784 485 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 SH3GL2Q99962 352 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 RSPH9Q9H1X1 276 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 GOLPH3LQ9H4A5 285 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 PRMT7Q9NVM4 692 aaPredicted RBP3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 TMEM51Q9NW97 253 aa3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 CHCHD3Q9NX63 227 aaKnown RBP3.44□□□□□ -1.86
HMGN1P28-201ENST00000521340 OR6C3Q9NZP0 311 aa3.44□□□□□ -1.86
Retrieved 100 of 20,778 RNA–protein pairs in 53.8 ms