RNA–Protein interactions for RNA: ENST00000517713.5

COL13A1-210, Transcript of collagen type XIII alpha 1 chain, humanhuman

APPRIS ALT2 TSL 5 BASIC

Gene COL13A1, Length 2,007 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL13A1-210ENST00000517713 TNFRSF12AQ9NP84 129 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 RNF112Q9ULX5 631 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 FIS1Q9Y3D6 152 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 PEX11AO75192 247 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 ARHGEF15O94989 841 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 PABPC1P11940 636 aaKnown RBP26.38■■□□□ 1.81
COL13A1-210ENST00000517713 COX4I1P13073 169 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 CHRM3P20309 590 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 RAP1GDS1P52306 607 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 PFKFB4Q16877 469 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 ACCSLQ4AC99 568 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 GRASPQ7Z6J2 395 aaPredicted RBP26.38■■□□□ 1.81
COL13A1-210ENST00000517713 CPSF7Q8N684 471 aaKnown RBP26.38■■□□□ 1.81
COL13A1-210ENST00000517713 TUBGCP5Q96RT8 1024 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 L3MBTL1Q9Y468 752 aa26.38■■□□□ 1.81
COL13A1-210ENST00000517713 SEC23IPQ9Y6Y8 1000 aaKnown RBP26.38■■□□□ 1.81
COL13A1-210ENST00000517713 LOC100653049A0A140TA62 436 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 E5RI56 91 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 SDHDO14521 159 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 UBFD1O14562 309 aaKnown RBP26.37■■□□□ 1.81
COL13A1-210ENST00000517713 BNIP3LO60238 219 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 ENTPD5O75356 428 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 KRT34O76011 436 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 TM7SF2O76062 418 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 PRAMEF1O95521 474 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 TYRP14679 529 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 ZNF697Q5TEC3 545 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 KIRREL3Q8IZU9 778 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 VOPP1Q96AW1 172 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 ZSWIM3Q96MP5 696 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 THTPAQ9BU02 230 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 MTIF3Q9H2K0 278 aaKnown RBP26.37■■□□□ 1.81
COL13A1-210ENST00000517713 IKZF3Q9UKT9 509 aa26.37■■□□□ 1.81
COL13A1-210ENST00000517713 G3BP2Q9UN86 482 aaKnown RBP26.37■■□□□ 1.81
COL13A1-210ENST00000517713 NOTCH4Q99466 2003 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 GAPDHSO14556 408 aaPredicted RBP26.36■■□□□ 1.81
COL13A1-210ENST00000517713 GFAPP14136 432 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 MYOGP15173 224 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 BTKQ06187 659 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 SCUBE1Q8IWY4 988 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 ZNF557Q8N988 423 aaPredicted RBP26.36■■□□□ 1.81
COL13A1-210ENST00000517713 CD200R1Q8TD46 325 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 CEP44Q9C0F1 390 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 APPL1Q9UKG1 709 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 SKAP2O75563 359 aaPredicted RBP26.36■■□□□ 1.81
COL13A1-210ENST00000517713 RB1P06400 928 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 PPARGP37231 505 aaPredicted RBP26.36■■□□□ 1.81
COL13A1-210ENST00000517713 IL2P60568 153 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 SLC25A3Q00325 362 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 ECT2LQ008S8 904 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 SATB1Q01826 763 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 TSNQ15631 228 aaKnown RBP26.36■■□□□ 1.81
COL13A1-210ENST00000517713 UGT3A1Q6NUS8 523 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 PCDH20Q8N6Y1 951 aaKnown RBP26.36■■□□□ 1.81
COL13A1-210ENST00000517713 GRIN3AQ8TCU5 1115 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 FAM161BQ96MY7 647 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 LENG8Q96PV6 779 aaPredicted RBP26.36■■□□□ 1.81
COL13A1-210ENST00000517713 SUV39H2Q9H5I1 410 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 ZNF385DQ9H6B1 395 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 RNPEPL1Q9HAU8 725 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 TRAF6Q9Y4K3 522 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 PCDHB1Q9Y5F3 818 aa26.36■■□□□ 1.81
COL13A1-210ENST00000517713 MYOFQ9NZM1 2061 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 SUPT3HB4E1H0 165 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 CDC7O00311 574 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 PRMT5O14744 637 aaPredicted RBP26.35■■□□□ 1.81
COL13A1-210ENST00000517713 PER2O15055 1255 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 SLC22A2O15244 555 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 SUPT3HO75486 399 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 TSPAN8P19075 237 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 KPNB1Q14974 876 aaKnown RBP26.35■■□□□ 1.81
COL13A1-210ENST00000517713 E2F5Q15329 346 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 CARD16Q5EG05 197 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 LY6G5CQ5SRR4 150 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 TMEM198Q66K66 360 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 ELMSAN1Q6PJG2 1045 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 SNX20Q7Z614 316 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 SERPINA9Q86WD7 417 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 CEP70Q8NHQ1 597 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 GIMAP7Q8NHV1 300 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 CATSPER2Q96P56 530 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 ASB2Q96Q27 587 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 LYSMD1Q96S90 227 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 CPEB1Q9BZB8 566 aaKnown RBP26.35■■□□□ 1.81
COL13A1-210ENST00000517713 ASB8Q9H765 288 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 MEAF6Q9HAF1 191 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 IL26Q9NPH9 171 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 HCFC2Q9Y5Z7 792 aa26.35■■□□□ 1.81
COL13A1-210ENST00000517713 NPEPPSL1A6NEC2 478 aa26.34■■□□□ 1.81
COL13A1-210ENST00000517713 SYCE1LA8MT33 242 aa26.34■■□□□ 1.81
COL13A1-210ENST00000517713 A8MX80 341 aa26.34■■□□□ 1.81
COL13A1-210ENST00000517713 ECI2O75521 394 aa26.34■■□□□ 1.81
COL13A1-210ENST00000517713 SIX3O95343 332 aaPredicted RBP26.34■■□□□ 1.81
COL13A1-210ENST00000517713 TSPAN12O95859 305 aa26.34■■□□□ 1.81
COL13A1-210ENST00000517713 PIK3R1P27986 724 aa26.34■■□□□ 1.81
COL13A1-210ENST00000517713 ULK2Q8IYT8 1036 aa26.34■■□□□ 1.81
COL13A1-210ENST00000517713 EEF1AKMT1Q8WVE0 214 aa26.34■■□□□ 1.81
COL13A1-210ENST00000517713 ECHDC3Q96DC8 303 aa26.34■■□□□ 1.81
COL13A1-210ENST00000517713 TTC1Q99614 292 aa26.34■■□□□ 1.81
COL13A1-210ENST00000517713 ZDHHC7Q9NXF8 308 aa26.34■■□□□ 1.81
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms