RNA–Protein interactions for RNA: ENST00000514110.5

SNHG4-208, Transcript of small nucleolar RNA host gene 4, humanhuman

TSL 1 (best)

Gene SNHG4, Length 679 nt, Biotype retained intron, Subcellular localisation Nucleoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNHG4-208ENST00000514110 PRICKLE2Q7Z3G6 844 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 SFRP1Q8N474 314 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 ZSCAN1Q8NBB4 408 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 AGBL5Q8NDL9 886 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 ART4Q93070 314 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 LYSMD1Q96S90 227 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 ARHGAP9Q9BRR9 750 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 DTLQ9NZJ0 730 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 VPS18Q9P253 973 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 TBC1D29Q9UFV1 150 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 DNPEPQ9ULA0 475 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 RPL26L1Q9UNX3 145 aaKnown RBP12.11□□□□□ -0.47
SNHG4-208ENST00000514110 PCDHGA3Q9Y5H0 932 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 B3GALT1Q9Y5Z6 326 aa12.11□□□□□ -0.47
SNHG4-208ENST00000514110 ZFC3H1O60293 1989 aaKnown RBP12.1□□□□□ -0.47
SNHG4-208ENST00000514110 BSNQ9UPA5 3926 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 EFCAB7A8K855 629 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 ANKRD66B4E2M5 251 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 KCNK1O00180 336 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 JCHAINP01591 159 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 CA4P22748 312 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 CSTF2P33240 577 aaKnown RBP eCLIP12.1□□□□□ -0.47
SNHG4-208ENST00000514110 UGT1A3P35503 534 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 CD86P42081 329 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 SPINT3P49223 89 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 GPLD1P80108 840 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 NFKB2Q00653 900 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 SNAP47Q5SQN1 464 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 XKR5Q6UX68 686 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 CHST15Q7LFX5 561 aaPredicted RBP12.1□□□□□ -0.47
SNHG4-208ENST00000514110 MAP7D3Q8IWC1 876 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 RAVER1Q8IY67 606 aaKnown RBP12.1□□□□□ -0.47
SNHG4-208ENST00000514110 CCDC13Q8IYE1 715 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 CNTD1Q8N815 330 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 CCNYQ8ND76 341 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 RAPGEF5Q92565 580 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 EID2BQ96D98 161 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 HDAC11Q96DB2 347 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 IQCDQ96DY2 449 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 AHCYL2Q96HN2 611 aaKnown RBP12.1□□□□□ -0.47
SNHG4-208ENST00000514110 SLC38A3Q99624 504 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 DPYSL5Q9BPU6 564 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 DDA1Q9BW61 102 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 SLC12A9Q9BXP2 914 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 ZMYND15Q9H091 742 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 STARD5Q9NSY2 213 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 SLC39A1Q9NY26 324 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 IFNKQ9P0W0 207 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 PDP2Q9P2J9 529 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 UVRAGQ9P2Y5 699 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 KCNK6Q9Y257 313 aa12.1□□□□□ -0.47
SNHG4-208ENST00000514110 A6NCN8 305 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 A8MU76 341 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 DUX1O43812 170 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 KRT7P08729 469 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 H2AFZP0C0S5 128 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 ACP5P13686 325 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 LIFP15018 202 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 MX2P20592 715 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 KDELR1P24390 212 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 HNRNPH3P31942 346 aaKnown RBP12.09□□□□□ -0.47
SNHG4-208ENST00000514110 PPM1FP49593 454 aaPredicted RBP12.09□□□□□ -0.47
SNHG4-208ENST00000514110 ATP1A2P50993 1020 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 HHEXQ03014 270 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 PPIDQ08752 370 aaKnown RBP12.09□□□□□ -0.47
SNHG4-208ENST00000514110 ZBTB17Q13105 803 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 NFATC2Q13469 925 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 GALNT3Q14435 633 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 CLCA4Q14CN2 919 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 ZFYVE27Q5T4F4 411 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 ZNF648Q5T619 568 aaPredicted RBP12.09□□□□□ -0.47
SNHG4-208ENST00000514110 IYDQ6PHW0 289 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 H2AFVQ71UI9 128 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 LYSMD3Q7Z3D4 306 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 FAM129CQ86XR2 697 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 BMPERQ8N8U9 685 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 CCDC112Q8NEF3 446 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 OR10G6Q8NH81 332 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 RNF157Q96PX1 679 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 MLPHQ9BV36 600 aaPredicted RBP12.09□□□□□ -0.47
SNHG4-208ENST00000514110 CEP41Q9BYV8 373 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 FAM117AQ9C073 453 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 FAM83DQ9H4H8 585 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 ARFGAP3Q9NP61 516 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 SARS2Q9NP81 518 aaKnown RBP12.09□□□□□ -0.47
SNHG4-208ENST00000514110 HAUS2Q9NVX0 235 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 PKD2L2Q9NZM6 624 aa12.09□□□□□ -0.47
SNHG4-208ENST00000514110 FLNBO75369 2602 aaKnown RBP12.08□□□□□ -0.47
SNHG4-208ENST00000514110 RGSL1A5PLK6 1076 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 B4E171 279 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 NUAK1O60285 661 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 RAD1O60671 282 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 SNX2O60749 519 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 WISP1O95388 367 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 PIRTP0C851 137 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 MAN1A1P33908 653 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 TSPAN7P41732 249 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 IFI35P80217 286 aaPredicted RBP12.08□□□□□ -0.48
SNHG4-208ENST00000514110 KCNC4Q03721 635 aa12.08□□□□□ -0.48
SNHG4-208ENST00000514110 ASTE1Q2TB18 679 aaPredicted RBP12.08□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 24 ms