RNA–Protein interactions for RNA: ENST00000508685.1

SH3RF1-203, Transcript of SH3 domain containing ring finger 1, humanhuman

TSL 1 (best)

Gene SH3RF1, Length 2,020 nt, Biotype processed transcript, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SH3RF1-203ENST00000508685 PSMD12O00232 456 aaPredicted RBP10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 KDELR3O43731 214 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 SNRPB2P08579 225 aaKnown RBP10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 GJA1P17302 382 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 PSMC3P17980 439 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 SLC7A1P30825 629 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 LEPRP48357 1165 aaKnown RBP10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 SCNN1BP51168 640 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 ARSDP51689 593 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 HTRA4P83105 476 aaPredicted RBP10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 LAMB3Q13751 1172 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 FASTKQ14296 549 aaKnown RBP10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 PTPRCAPQ14761 206 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 ZNF789Q5FWF6 425 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 TSTD2Q5T7W7 516 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 ARHGAP22Q7Z5H3 698 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 ITIH5Q86UX2 942 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 CEP97Q8IW35 865 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 GOLM1Q8NBJ4 401 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 PCYOX1LQ8NBM8 494 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 WFDC5Q8TCV5 224 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 BLOC1S5Q8TDH9 187 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 BADQ92934 168 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 GFM2Q969S9 779 aaKnown RBP10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 EME1Q96AY2 570 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 ROPN1LQ96C74 230 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 TMA16Q96EY4 203 aaKnown RBP10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 ZNF599Q96NL3 588 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 PSKH2Q96QS6 385 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 UHRF1Q96T88 793 aaPredicted RBP10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 CINPQ9BW66 212 aaPredicted RBP10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 SPAG4Q9NPE6 437 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 GTSE1Q9NYZ3 720 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 UBAP1Q9NZ09 502 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 PCDHGA7Q9Y5G6 932 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 ARL5AQ9Y689 179 aa10.98□□□□□ -0.65
SH3RF1-203ENST00000508685 MROH6A6NGR9 719 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 OR51F1A6NGY5 319 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 BBIP1A8MTZ0 92 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 HIDE1A8MVS5 230 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 LDB2O43679 373 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 SNAP91O60641 907 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 TBL1XO60907 577 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 TMCC1O94876 653 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 OLFM2O95897 454 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 CKMP06732 381 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 C8AP07357 584 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 SERPINF2P08697 491 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 IMPDH1P20839 514 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 MZF1P28698 734 aaPredicted RBP10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 ERVFC1P60507 584 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 TXNL4AP83876 142 aaKnown RBP10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 ARF5P84085 180 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 SULT2A1Q06520 285 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 PDAP1Q13442 181 aaKnown RBP10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 BIRC2Q13490 618 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 APOFQ13790 326 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 LRP8Q14114 963 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 TECRLQ5HYJ1 363 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 TMEM198Q66K66 360 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 ALG1LQ6GMV1 187 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 PRMT9Q6P2P2 845 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 CHST9Q7L1S5 443 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 PTAR1Q7Z6K3 402 aaPredicted RBP10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 TMC8Q8IU68 726 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 LILRA2Q8N149 483 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 CARNMT1Q8N4J0 409 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 TXNDC5Q8NBS9 432 aaKnown RBP10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 CLP1Q92989 425 aaKnown RBP10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 USP13Q92995 863 aaPredicted RBP10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 PPP1R36Q96LQ0 422 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 ZNF597Q96LX8 424 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 NPAS2Q99743 824 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 OMDQ99983 421 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 GDF15Q99988 308 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 SLC2A11Q9BYW1 496 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 TIMMDC1Q9NPL8 285 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 C8orf4Q9NR00 106 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 IGSF5Q9NSI5 407 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 SEPT3Q9UH03 358 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 STOML2Q9UJZ1 356 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 COLQQ9Y215 455 aaPredicted RBP10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 MYO7AQ13402 2215 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 A0A1W2PRU2 124 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 H0Y626 953 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 TRIM24O15164 1050 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 SLC7A4O43246 635 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 CXCL14O95715 111 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 CD160O95971 181 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 FGBP02675 491 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 ZNF26P17031 533 aaPredicted RBP10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 DPP6P42658 865 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 CCR10P46092 362 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 NAA20P61599 178 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 MYBPC1Q00872 1141 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 PABPC1LQ4VXU2 614 aaKnown RBP10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 LRRC23Q53EV4 343 aaPredicted RBP10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 CNSTQ6PJW8 725 aa10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 RBM44Q6ZP01 1051 aaKnown RBP10.97□□□□□ -0.65
SH3RF1-203ENST00000508685 SPRED2Q7Z698 418 aa10.97□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms