RNA–Protein interactions for RNA: ENST00000508308.1

HMGN1P16-201, Transcript of high mobility group nucleosome binding domain 1 pseudogene 16, humanhuman

BASIC

Gene HMGN1P16, Length 283 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGN1P16-201ENST00000508308 ACTR1AP61163 376 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 NFKB2Q00653 900 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 GBE1Q04446 702 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 CLPPQ16740 277 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 MAP9Q49MG5 647 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 ANKRD20A8PQ5CZ79 823 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 CHCHD2P9Q5T1J5 151 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 ARMC12Q5T9G4 340 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 CAVIN1Q6NZI2 390 aaKnown RBP6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 USP45Q70EL2 814 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 MARK2Q7KZI7 788 aaKnown RBP6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 ZNF765Q7L2R6 523 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 LUZP1Q86V48 1076 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 SFRP1Q8N474 314 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 ZC3H8Q8N5P1 291 aaKnown RBP eCLIP6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 PAF1Q8N7H5 531 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 CNTD1Q8N815 330 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 OR4D9Q8NGE8 314 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 KIAA1524Q8TCG1 905 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 SLC37A2Q8TED4 501 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 JPH3Q8WXH2 748 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 NKD1Q969G9 470 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 FAF2Q96CS3 445 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 TSGA13Q96PP4 275 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 OR2M4Q96R27 311 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 LYSMD1Q96S90 227 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 SLC12A9Q9BXP2 914 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 TDRD1Q9BXT4 1180 aaKnown RBP6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 PACSIN1Q9BY11 444 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 CBX8Q9HC52 389 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 OCIAD1Q9NX40 245 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 KCTD5Q9NXV2 234 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 DTLQ9NZJ0 730 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 RCOR3Q9P2K3 495 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 IP6K2Q9UHH9 426 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 ANAPC7Q9UJX3 599 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 CAPN11Q9UMQ6 739 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 CHKBQ9Y259 395 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 PCDHGA3Q9Y5H0 932 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 B3GALT1Q9Y5Z6 326 aa6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 USP9YO00507 2555 aaPredicted RBP6.39□□□□□ -1.39
HMGN1P16-201ENST00000508308 GOLGA6CA6NDK9 693 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 GOLGA6BA6NDN3 693 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 PRR19A6NJB7 356 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 C3orf70A6NLC5 250 aaPredicted RBP6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 INPP4BO15327 924 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 SLC28A2O43868 658 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 PROSCO94903 275 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 GYPCP04921 128 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 GOLGA6DP0CG33 693 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 ZNF30P17039 623 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 CCNCP24863 283 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 SERPINB6P35237 376 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 UGT1A3P35503 534 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 ANP32AP39687 249 aaKnown RBP6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 FASLGP48023 281 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 COPS2P61201 443 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 ZBED6P86452 979 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 FANCCQ00597 558 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 NFATC3Q12968 1075 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 ZBTB17Q13105 803 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 TRA2AQ13595 282 aaKnown RBP eCLIP6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 KRT81Q14533 505 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 QPCTQ16769 361 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 ASTE1Q2TB18 679 aaPredicted RBP6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 FILIP1LQ4L180 1135 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 MANEAQ5SRI9 462 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 HENMT1Q5T8I9 393 aaKnown RBP6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 LCE3BQ5TA77 95 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 ALKBH5Q6P6C2 394 aaKnown RBP6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 ARHGAP22Q7Z5H3 698 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 LRRC49Q8IUZ0 686 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 NRSN1Q8IZ57 195 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 CPLX3Q8WVH0 158 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 RAPGEF5Q92565 580 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 ART4Q93070 314 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 TAAR9Q96RI9 348 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 TRIB3Q96RU7 358 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 POLR1EQ9GZS1 481 aaKnown RBP6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 BRD8Q9H0E9 1235 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 CDH19Q9H159 772 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 RBM22Q9NW64 420 aaKnown RBP eCLIP6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 WDR70Q9NW82 654 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 GOLGA6AQ9NYA3 693 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 VPS18Q9P253 973 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 TBC1D29Q9UFV1 150 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 ADGRG1Q9Y653 693 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 BZW2Q9Y6E2 419 aaKnown RBP6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 DOPEY2Q9Y3R5 2298 aa6.38□□□□□ -1.39
HMGN1P16-201ENST00000508308 B4E171 279 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 ANKRD66B4E2M5 251 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 GOLGA6L22H0YM25 854 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 STMND1H3BQB6 276 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 MYO1FO00160 1098 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 KCNK1O00180 336 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 SUV39H1O43463 412 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 WISP1O95388 367 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 SERPINC1P01008 464 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 JCHAINP01591 159 aa6.37□□□□□ -1.39
HMGN1P16-201ENST00000508308 LIFP15018 202 aa6.37□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms