RNA–Protein interactions for RNA: ENST00000504761.6

TCOF1-207, Transcript of treacle ribosome biogenesis factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TCOF1, Length 4,467 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCOF1-207ENST00000504761 OTUD3Q5T2D3 398 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-207ENST00000504761 ZC3HC1Q86WB0 502 aaKnown RBP14.03□□□□□ -0.16
TCOF1-207ENST00000504761 RGL4Q8IZJ4 473 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 CENPLQ8N0S6 344 aaPredicted RBP14.03□□□□□ -0.16
TCOF1-207ENST00000504761 KLHDC9Q8NEP7 349 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 OR14C36Q8NHC7 312 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 AGAP11Q8TF27 550 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 EBF3Q9H4W6 596 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 WDR6Q9NNW5 1121 aaKnown RBP14.03□□□□□ -0.16
TCOF1-207ENST00000504761 GIMAP4Q9NUV9 329 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 MTRRQ9UBK8 725 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 STK39Q9UEW8 545 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 LEFTY2O00292 366 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 STC2O76061 302 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 ALDH1A2O94788 518 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 TYRP14679 529 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 IL4RP24394 825 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 HORMAD1Q86X24 394 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 NRBF2Q96F24 287 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 SUV39H2Q9H5I1 410 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 VPS51Q9UID3 782 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 ZNF711Q9Y462 761 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 ACTL7AQ9Y615 435 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 LY75O60449 1722 aa14.03□□□□□ -0.16
TCOF1-207ENST00000504761 TNKS1BP1Q9C0C2 1729 aaKnown RBP14.03□□□□□ -0.16
TCOF1-207ENST00000504761 PRAMEF11O60813 436 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 OTCP00480 354 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 DNTTP04053 509 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 APODP05090 189 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 CST5P28325 142 aaPredicted RBP14.02□□□□□ -0.16
TCOF1-207ENST00000504761 TIGD2Q4W5G0 525 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 ZYG11AQ6WRX3 759 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 DHFR2Q86XF0 187 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 ASZ1Q8WWH4 475 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 C7orf26Q96N11 449 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 SEMA6AQ9H2E6 1030 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 IMP3Q9NV31 184 aaKnown RBP14.02□□□□□ -0.16
TCOF1-207ENST00000504761 POLR2AP24928 1970 aaKnown RBP14.02□□□□□ -0.16
TCOF1-207ENST00000504761 ITM2AO43736 263 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 STK19P49842 368 aaPredicted RBP14.02□□□□□ -0.16
TCOF1-207ENST00000504761 CCNHP51946 323 aaPredicted RBP14.02□□□□□ -0.16
TCOF1-207ENST00000504761 NEK3P51956 506 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 MFSD4BQ5TF39 518 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 OR2AP1Q8NGE2 309 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 NSMCE2Q96MF7 247 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 FCRL3Q96P31 734 aaPredicted RBP14.02□□□□□ -0.16
TCOF1-207ENST00000504761 C1QTNF7Q9BXJ2 289 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 MIR1-1HGQ9H1L0 117 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 TRPC4Q9UBN4 977 aa14.02□□□□□ -0.16
TCOF1-207ENST00000504761 FAF1Q9UNN5 650 aaPredicted RBP14.02□□□□□ -0.16
TCOF1-207ENST00000504761 A8MUI8 341 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 SLC31A1O15431 190 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 MAFKO60675 156 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 KRT36O76013 467 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 NTHL1P78549 312 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 SLC20A2Q08357 652 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 PRKG2Q13237 762 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 GK5Q6ZS86 529 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 RPS27LQ71UM5 84 aaKnown RBP14.02□□□□□ -0.17
TCOF1-207ENST00000504761 CPA6Q8N4T0 437 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 NOL11Q9H8H0 719 aaKnown RBP14.02□□□□□ -0.17
TCOF1-207ENST00000504761 ZDHHC4Q9NPG8 344 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 CLDND1Q9NY35 253 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 FETUBQ9UGM5 382 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 GGA2Q9UJY4 613 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 PRNPP04156 253 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 RPIAP49247 311 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 KLF10Q13118 480 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 ZBTB49Q6ZSB9 765 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 CFAP206Q8IYR0 622 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 ZNF614Q8N883 585 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 THEGQ9P2T0 379 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 EIF2B4Q9UI10 523 aaKnown RBP14.02□□□□□ -0.17
TCOF1-207ENST00000504761 PCDHB1Q9Y5F3 818 aa14.02□□□□□ -0.17
TCOF1-207ENST00000504761 SIN3BO75182 1162 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 RHOP08100 348 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 RFC2P35250 354 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 PSME3P61289 254 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 NRG1Q02297 640 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-207ENST00000504761 DSG1Q02413 1049 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 RFTN1Q14699 578 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-207ENST00000504761 WASHC2DQ5SRD0 308 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 LYPLAL1Q5VWZ2 237 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 ZBTB2Q8N680 514 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 C1orf74Q96LT6 269 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 RNF145Q96MT1 663 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 ZNF599Q96NL3 588 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 TSSK3Q96PN8 268 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 MYCBPQ99417 103 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-207ENST00000504761 PCDH12Q9NPG4 1184 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 LIMD1Q9UGP4 676 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 PSMD13Q9UNM6 376 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 RREB1Q92766 1687 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 H3BM21 787 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 K7ERQ8 282 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 KPNA5O15131 536 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 FKBP6O75344 327 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 VAC14Q08AM6 782 aa14.01□□□□□ -0.17
TCOF1-207ENST00000504761 MAD2L1Q13257 205 aaPredicted RBP14.01□□□□□ -0.17
TCOF1-207ENST00000504761 ACAP2Q15057 778 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 50.5 ms