RNA–Protein interactions for RNA: ENST00000497511.5

SKAP2-209, Transcript of src kinase associated phosphoprotein 2, human

TSL 4

Gene SKAP2, Length 585 nt, Biotype processed transcript, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SKAP2-209	ENST00000497511	RAPGEF1	Q13905	1077 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	INO80D	Q53TQ3	878 aa	Predicted RBP	10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	NKAIN2	Q5VXU1	208 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	ANKS6	Q68DC2	871 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	SLC30A9	Q6PML9	568 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	CLEC18B	Q6UXF7	455 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	NLGN4X	Q8N0W4	816 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	CLEC18C	Q8NCF0	446 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	C2CD4A	Q8NCU7	369 aa	Predicted RBP	10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	NLGN4Y	Q8NFZ3	816 aa	Predicted RBP	10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	OR4D9	Q8NGE8	314 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	HCAR2	Q8TDS4	363 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	AHCYL2	Q96HN2	611 aa	Known RBP	10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	SPATS2L	Q9NUQ6	558 aa	Known RBP	10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	UBA2	Q9UBT2	640 aa	Predicted RBP	10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	VPS4A	Q9UN37	437 aa		10.83	□□□□□ -0.68
SKAP2-209	ENST00000497511	RELN	P78509	3460 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	LOC100996750	A0A140TA64	210 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	GOLGA6C	A6NDK9	693 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	GOLGA6B	A6NDN3	693 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	FAM72C	H0Y354	149 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	KRT7	P08729	469 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	GOLGA6D	P0CG33	693 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	TCN2	P20062	427 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	NME2	P22392	152 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	PON1	P27169	355 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	CD1C	P29017	333 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	EPHB2	P29323	1055 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	SERPINA4	P29622	427 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	GPR3	P46089	330 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	MTIF2	P46199	727 aa	Known RBP	10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	GNPDA1	P46926	289 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	MLLT10	P55197	1068 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	PEX6	Q13608	980 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	ACOX1	Q15067	660 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	C15orf59	Q2T9L4	293 aa	Predicted RBP	10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	SNAP47	Q5SQN1	464 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	FHL5	Q5TD97	284 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	FAM72A	Q5TYM5	149 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	MANEAL	Q5VSG8	457 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	FAM72D	Q6L9T8	149 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	TRNP1	Q6NT89	227 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	PAOX	Q6QHF9	649 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	FAM72B	Q86X60	149 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	CAMK1D	Q8IU85	385 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	UNC5B	Q8IZJ1	945 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	RXFP2	Q8WXD0	754 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	STARD8	Q92502	1023 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	VOPP1	Q96AW1	172 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	MIB2	Q96AX9	1013 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	TIGD1	Q96MW7	591 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	ZNF641	Q96N77	438 aa	Predicted RBP	10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	TEFM	Q96QE5	360 aa	Known RBP	10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	CTRC	Q99895	268 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	DPYSL5	Q9BPU6	564 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	KRTAP4-6	Q9BYQ5	205 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	ATP13A3	Q9H7F0	1226 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	PHPT1	Q9NRX4	125 aa	Predicted RBP	10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	OCIAD1	Q9NX40	245 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	GOLGA6A	Q9NYA3	693 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	TAAR2	Q9P1P5	351 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	TMEM59L	Q9UK28	342 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	TP53TG5	Q9Y2B4	290 aa		10.82	□□□□□ -0.68
SKAP2-209	ENST00000497511	SCO2	A0A1W2PP80	73 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	TSPAN11	A1L157	253 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511		A8MU76	341 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511		A8MX80	341 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511		B4E171	279 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	RASA4B	C9J798	803 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	MKRN2OS	H3BPM6	223 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	RASA4	O43374	803 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	CREB3	O43889	395 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	LSM8	O95777	96 aa	Known RBP	10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	FGF1	P05230	155 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	THRA	P10827	490 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	CYP11B1	P15538	503 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	AK4	P27144	223 aa	Predicted RBP	10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	ARNT	P27540	789 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	OAS2	P29728	719 aa	Known RBP	10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	TSPAN7	P41732	249 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	POLR2L	P62875	67 aa	Known RBP	10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	PARP15	Q460N3	678 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	RAB6C	Q53S08	254 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	ARTN	Q5T4W7	220 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	NAA35	Q5VZE5	725 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	PNCK	Q6P2M8	343 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	SULF2	Q8IWU5	870 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	RTL3	Q8N8U3	475 aa	Known RBP	10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	GIMAP7	Q8NHV1	300 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	PATE1	Q8WXA2	126 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	CPA5	Q8WXQ8	436 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	TUBGCP5	Q96RT8	1024 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	LGR4	Q9BXB1	951 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	KLC2	Q9H0B6	622 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	RAB6C	Q9H0N0	254 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	LHX3	Q9UBR4	397 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	AJAP1	Q9UKB5	411 aa	Predicted RBP	10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	PILRA	Q9UKJ1	303 aa		10.81	□□□□□ -0.68
SKAP2-209	ENST00000497511	SPTBN1	Q01082	2364 aa	Known RBP	10.8	□□□□□ -0.68
SKAP2-209	ENST00000497511	SCN8A	Q9UQD0	1980 aa		10.8	□□□□□ -0.68

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