RNA–Protein interactions for RNA: ENST00000494047.5

RFC4-214, Transcript of replication factor C subunit 4, humanhuman

TSL 2

Gene RFC4, Length 1,393 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RFC4-214ENST00000494047 ALG9Q9H6U8 611 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 MAGEE1Q9HCI5 957 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 TMEM30AQ9NV96 361 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 UXTQ9UBK9 157 aaPredicted RBP11.44□□□□□ -0.58
RFC4-214ENST00000494047 SLC2A6Q9UGQ3 507 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 CNOT6Q9ULM6 557 aaKnown RBP11.44□□□□□ -0.58
RFC4-214ENST00000494047 GBF1Q92538 1859 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 TANC1Q9C0D5 1861 aa11.44□□□□□ -0.58
RFC4-214ENST00000494047 UBXN8O00124 270 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 FBP2O00757 339 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 HTRA2O43464 458 aaPredicted RBP11.43□□□□□ -0.58
RFC4-214ENST00000494047 LDB2O43679 373 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 KLK8O60259 260 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 SORBS2O94875 1100 aaKnown RBP11.43□□□□□ -0.58
RFC4-214ENST00000494047 PGM3O95394 542 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 ENO2P09104 434 aaPredicted RBP11.43□□□□□ -0.58
RFC4-214ENST00000494047 ATXN1LP0C7T5 689 aaKnown RBP11.43□□□□□ -0.58
RFC4-214ENST00000494047 CDH2P19022 906 aaPredicted RBP11.43□□□□□ -0.58
RFC4-214ENST00000494047 GRIA2P42262 883 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 ZNF460Q14592 562 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 TAF1AQ15573 450 aaPredicted RBP11.43□□□□□ -0.58
RFC4-214ENST00000494047 PCSK7Q16549 785 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 FXNQ16595 210 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 UNC50Q53HI1 259 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 MS4A13Q5J8X5 152 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 SIRPB2Q5JXA9 342 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 PIK3R6Q5UE93 754 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 ZNF280DQ6N043 979 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 DHRS4L2Q6PKH6 230 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 BLOC1S3Q6QNY0 202 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 ARHGAP36Q6ZRI8 547 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 GPR141Q7Z602 305 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 ZNF683Q8IZ20 524 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 PTGR2Q8N8N7 351 aaPredicted RBP11.43□□□□□ -0.58
RFC4-214ENST00000494047 PAPD5Q8NDF8 572 aaKnown RBP11.43□□□□□ -0.58
RFC4-214ENST00000494047 OR10T2Q8NGX3 314 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 TFAP2CQ92754 450 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 HDAC10Q969S8 669 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 NRBF2Q96F24 287 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 HMCESQ96FZ2 354 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 MAGED4Q96JG8 741 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 PPP1R36Q96LQ0 422 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 MYRFLQ96LU7 910 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 TRIB3Q96RU7 358 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 ATOH8Q96SQ7 321 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 BDH2Q9BUT1 245 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 OSBPL10Q9BXB5 764 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 GRIP2Q9C0E4 1043 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 AGPAT4Q9NRZ5 378 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 NLE1Q9NVX2 485 aaPredicted RBP11.43□□□□□ -0.58
RFC4-214ENST00000494047 UBAP1Q9NZ09 502 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 POLG2Q9UHN1 485 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 RNF112Q9ULX5 631 aa11.43□□□□□ -0.58
RFC4-214ENST00000494047 G3BP2Q9UN86 482 aaKnown RBP11.43□□□□□ -0.58
RFC4-214ENST00000494047 TIMM13Q9Y5L4 95 aaPredicted RBP11.43□□□□□ -0.58
RFC4-214ENST00000494047 A0A1W2PQH9 124 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 TTC24A2A3L6 582 aaPredicted RBP11.42□□□□□ -0.58
RFC4-214ENST00000494047 TRIM64A6NGJ6 449 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 F5H5T6 163 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 VILLO15195 856 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 SNX2O60749 519 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 EFCAB14O75071 495 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 BAIAP3O94812 1187 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 RASAL1O95294 804 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 ESRRBO95718 433 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 HPRP00739 348 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 IGLV3-27P01718 113 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 JUNP05412 331 aaKnown RBP11.42□□□□□ -0.58
RFC4-214ENST00000494047 RPS17P08708 135 aaKnown RBP11.42□□□□□ -0.58
RFC4-214ENST00000494047 PRR35P0CG20 571 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 CKBP12277 381 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 YWHAQP27348 245 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 HTR1EP28566 365 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 GRIA3P42263 894 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 ERFP50548 548 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 ERVK-8P63133 956 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 UGT3A2Q3SY77 523 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 C6orf52Q5T4I8 152 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 GPR158Q5T848 1215 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 ZNF697Q5TEC3 545 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 PAOXQ6QHF9 649 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 ABRAXAS1Q6UWZ7 409 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 ZNF783Q6ZMS7 281 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 LRRC8DQ7L1W4 858 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 PTAR1Q7Z6K3 402 aaPredicted RBP11.42□□□□□ -0.58
RFC4-214ENST00000494047 SCD5Q86SK9 330 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 C14orf80Q86SX3 495 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 GALNT4Q8N4A0 578 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 DPP10Q8N608 796 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 PCDH20Q8N6Y1 951 aaKnown RBP11.42□□□□□ -0.58
RFC4-214ENST00000494047 NETO2Q8NC67 525 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 TRPV3Q8NET8 790 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 ARRDC2Q8TBH0 407 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 TUBGCP3Q96CW5 907 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 PHF21BQ96EK2 531 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 SCLYQ96I15 445 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 SH3GL1Q99961 368 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 MGME1Q9BQP7 344 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 ADGRE3Q9BY15 652 aa11.42□□□□□ -0.58
RFC4-214ENST00000494047 COQ10BQ9H8M1 238 aa11.42□□□□□ -0.58
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms