RNA–Protein interactions for RNA: ENST00000493955.1

SMC2-205, Transcript of structural maintenance of chromosomes 2, humanhuman

TSL 1 (best)

Gene SMC2, Length 1,408 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC2-205ENST00000493955 ADGRG3Q86Y34 549 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 DSELQ8IZU8 1212 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 OR8H3Q8N146 312 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 GPATCH11Q8N954 259 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 TSPAN14Q8NG11 270 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 MPLKIPQ8TAP9 179 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 HM13Q8TCT9 377 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 LPAR1Q92633 364 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 CHFRQ96EP1 664 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 SIPA1Q96FS4 1042 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 VMP1Q96GC9 406 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 FER1L6-AS2Q96M78 137 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 JAKMIP1Q96N16 626 aaKnown RBP6.16□□□□□ -1.42
SMC2-205ENST00000493955 GBP5Q96PP8 586 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 ST6GALNAC4Q9H4F1 302 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 MMP25Q9NPA2 562 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 PFDN4Q9NQP4 134 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 ACSL5Q9ULC5 683 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 COX11Q9Y6N1 276 aa6.16□□□□□ -1.42
SMC2-205ENST00000493955 TMEM272A0A1B0GTI8 110 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 MS4A18H0YCH9 400 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 TADA2AO75478 443 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 RBMXL2O75526 392 aaKnown RBP6.15□□□□□ -1.43
SMC2-205ENST00000493955 NDUFB8O95169 186 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 EGFP01133 1207 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 FYNP06241 537 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 HNRNPH1P31943 449 aaKnown RBP6.15□□□□□ -1.43
SMC2-205ENST00000493955 ME1P48163 572 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 ZP1P60852 638 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 SIRPAP78324 504 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 SNAPC1Q16533 368 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 PPP6R3Q5H9R7 873 aaPredicted RBP6.15□□□□□ -1.43
SMC2-205ENST00000493955 DCLRE1AQ6PJP8 1040 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 SLC2A7Q6PXP3 512 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 LDB1Q86U70 411 aaPredicted RBP6.15□□□□□ -1.43
SMC2-205ENST00000493955 CCDC190Q86UF4 302 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 OR10S1Q8NGN2 331 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 KIF18AQ8NI77 898 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 TEKT4Q8WW24 435 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 INPP5DQ92835 1189 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 COQ8BQ96D53 544 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 DDOQ99489 341 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 NAA11Q9BSU3 229 aaPredicted RBP6.15□□□□□ -1.43
SMC2-205ENST00000493955 SCAND2PQ9GZW5 306 aaPredicted RBP6.15□□□□□ -1.43
SMC2-205ENST00000493955 KCNK15Q9H427 330 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 KRCC1Q9NPI7 259 aaPredicted RBP6.15□□□□□ -1.43
SMC2-205ENST00000493955 SIRT3Q9NTG7 399 aaPredicted RBP6.15□□□□□ -1.43
SMC2-205ENST00000493955 ARGLU1Q9NWB6 273 aaPredicted RBP6.15□□□□□ -1.43
SMC2-205ENST00000493955 LARSQ9P2J5 1176 aaKnown RBP6.15□□□□□ -1.43
SMC2-205ENST00000493955 TUBE1Q9UJT0 475 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 DBNLQ9UJU6 430 aaKnown RBP6.15□□□□□ -1.43
SMC2-205ENST00000493955 GTF3C4Q9UKN8 822 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 CDC14AQ9UNH5 594 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 PAM16Q9Y3D7 125 aa6.15□□□□□ -1.43
SMC2-205ENST00000493955 TMEM8BA6NDV4 472 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 EIF4E1BA6NMX2 242 aaKnown RBP6.14□□□□□ -1.43
SMC2-205ENST00000493955 TIMM23O14925 209 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 ITM2AO43736 263 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 EPN2O95208 641 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 ARSBP15848 533 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 GJA1P17302 382 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 PTAFRP25105 342 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 GP5P40197 560 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 TNNT3P45378 269 aaPredicted RBP6.14□□□□□ -1.43
SMC2-205ENST00000493955 CSNK2A1P68400 391 aaPredicted RBP6.14□□□□□ -1.43
SMC2-205ENST00000493955 KRTAP1-1Q07627 177 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 MAD2L1Q13257 205 aaPredicted RBP6.14□□□□□ -1.43
SMC2-205ENST00000493955 GPR18Q14330 331 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 TRIP6Q15654 476 aaKnown RBP6.14□□□□□ -1.43
SMC2-205ENST00000493955 CBWD6Q4V339 395 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 CBWD3Q5JTY5 395 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 WASHC2DQ5SRD0 308 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 IQCHQ86VS3 1027 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 METTL23Q86XA0 190 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 AADATQ8N5Z0 425 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 MIGA1Q8NAN2 632 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 RBM15BQ8NDT2 890 aaKnown RBP6.14□□□□□ -1.43
SMC2-205ENST00000493955 CSNK2A3Q8NEV1 391 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 GOT1L1Q8NHS2 421 aaPredicted RBP6.14□□□□□ -1.43
SMC2-205ENST00000493955 CFAP61Q8NHU2 1237 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 DDB2Q92466 427 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 APBB2Q92870 758 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 HDAC11Q96DB2 347 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 TMEM39BQ9GZU3 492 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 ISCUQ9H1K1 167 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 SEBOXQ9HB31 216 aaPredicted RBP6.14□□□□□ -1.43
SMC2-205ENST00000493955 CNGB3Q9NQW8 809 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 TUBA8Q9NY65 449 aaPredicted RBP6.14□□□□□ -1.43
SMC2-205ENST00000493955 HAO2Q9NYQ3 351 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 TAS2R14Q9NYV8 317 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 PCDHGA5Q9Y5G8 931 aa6.14□□□□□ -1.43
SMC2-205ENST00000493955 FLT1P17948 1338 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 H0YIN7 160 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 I6L893 689 aaPredicted RBP6.13□□□□□ -1.43
SMC2-205ENST00000493955 J3KR12 359 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 DIAPH2O60879 1101 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 RECQL5O94762 991 aaPredicted RBP6.13□□□□□ -1.43
SMC2-205ENST00000493955 ZWINTO95229 277 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 KCNK5O95279 499 aa6.13□□□□□ -1.43
SMC2-205ENST00000493955 TRUB2O95900 331 aaKnown RBP6.13□□□□□ -1.43
Retrieved 100 of 20,778 RNA–protein pairs in 43.7 ms