RNA–Protein interactions for RNA: ENST00000489414.5

EXOSC3-206, Transcript of exosome component 3, humanhuman

TSL 4

Gene EXOSC3, Length 535 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EXOSC3-206ENST00000489414 ZNF830Q96NB3 372 aaPredicted RBP7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 IP6K3Q96PC2 410 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 SLC38A3Q99624 504 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 XPO4Q9C0E2 1151 aaKnown RBP7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 TMEM60Q9H2L4 133 aa7.41□□□□□ -1.22
EXOSC3-206ENST00000489414 NEMP1O14524 444 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 CCP110O43303 1012 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 THAP12O43422 761 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 SLC26A4O43511 780 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 ACSL4O60488 711 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 TM7SF2O76062 418 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 AVPP01185 164 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 IGLV3-27P01718 113 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 IGHEP01854 428 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 C9P02748 559 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 PGRP06401 933 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 TPM2P07951 284 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 TPM1P09493 284 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 CHRNB4P30926 498 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 CCT6AP40227 531 aaKnown RBP7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 SLC11A2P49281 568 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 TERF1P54274 439 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 YWHAGP61981 247 aaKnown RBP eCLIP7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 GPS2Q13227 327 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 FBLN7Q53RD9 439 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 ZNF658Q5TYW1 1059 aaPredicted RBP7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 AGAP7PQ5VUJ5 663 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 KRT79Q5XKE5 535 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 KLHL10Q6JEL2 608 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 LCN10Q6JVE6 187 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 LRRC8AQ8IWT6 810 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 ARHGAP18Q8N392 663 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 ZSWIM2Q8NEG5 633 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 MYRIPQ8NFW9 859 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 OR5B17Q8NGF7 314 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 RAB7BQ96AH8 199 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 C9orf72Q96LT7 481 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 AGAP4Q96P64 663 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 MMTAG2Q9BU76 263 aaKnown RBP7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 GSDMCQ9BYG8 508 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 EPS8L2Q9H6S3 715 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 YAE1D1Q9NRH1 226 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 SPTLC3Q9NUV7 552 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 FANCLQ9NW38 375 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 RBAKQ9NYW8 714 aaPredicted RBP7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 CRIM1Q9NZV1 1036 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 LARSQ9P2J5 1176 aaKnown RBP7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 SFMBT1Q9UHJ3 866 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 HS3ST2Q9Y278 367 aa7.4□□□□□ -1.22
EXOSC3-206ENST00000489414 CR1P17927 2039 aa7.4□□□□□ -1.23
EXOSC3-206ENST00000489414 A0A087X1B8 175 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 K7ENM7 598 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 TULP1O00294 542 aaPredicted RBP7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 TNFRSF10CO14798 259 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 PSMA7O14818 248 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 TOX3O15405 576 aaPredicted RBP7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 TGFB1I1O43294 461 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 CD5LO43866 347 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 SMPD2O60906 423 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 CPNE3O75131 537 aaKnown RBP7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 ZRANB2O95218 330 aaKnown RBP eCLIP7.39□□□□□ -1.231e-7■□□□□ 10.3
EXOSC3-206ENST00000489414 CAPN1P07384 714 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 SKILP12757 684 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 SRCP12931 536 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 MX2P20592 715 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 OTX2P32243 289 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 POLD2P49005 469 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 SEPHS1P49903 392 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 GFERP55789 205 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 TNNC1P63316 161 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 PAK1Q13153 545 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 LRRC14Q15048 493 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 IL17AQ16552 155 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 WSCD2Q2TBF2 565 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 WDR72Q3MJ13 1102 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 MS4A13Q5J8X5 152 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 ARSKQ6UWY0 536 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 C3P1Q6ZMU1 363 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 SV2BQ7L1I2 683 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 DOLPP1Q86YN1 238 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 CYP4X1Q8N118 509 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 THAP3Q8WTV1 239 aaPredicted RBP7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 ALG14Q96F25 216 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 ANKRD36BP1Q96IX9 119 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 PIP5K1AQ99755 562 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 FAM213AQ9BRX8 229 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 NUCKS1Q9H1E3 243 aaKnown RBP7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 KCNF1Q9H3M0 494 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 ZNF696Q9H7X3 374 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 PDE11AQ9HCR9 933 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 WASH6PQ9NQA3 447 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 OLA1Q9NTK5 396 aaKnown RBP7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 EXOC1Q9NV70 894 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 INTS13Q9NVM9 706 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 CBLCQ9ULV8 474 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 ST14Q9Y5Y6 855 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 MPDZO75970 2070 aa7.39□□□□□ -1.23
EXOSC3-206ENST00000489414 BICDL2A1A5D9 508 aa7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 KIF2AO00139 706 aaPredicted RBP7.38□□□□□ -1.23
EXOSC3-206ENST00000489414 AREL1O15033 823 aa7.38□□□□□ -1.23
Retrieved 100 of 20,778 RNA–protein pairs in 73.9 ms