RNA–Protein interactions for RNA: ENST00000487747.5

SMC4-219, Transcript of structural maintenance of chromosomes 4, humanhuman

TSL 5

Gene SMC4, Length 637 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC4-219ENST00000487747 LRRC8DQ7L1W4 858 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 CCDC13Q8IYE1 715 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 RBM15BQ8NDT2 890 aaKnown RBP3.91□□□□□ -1.78
SMC4-219ENST00000487747 APBB2Q92870 758 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 SENP5Q96HI0 755 aaPredicted RBP3.91□□□□□ -1.78
SMC4-219ENST00000487747 ATOH8Q96SQ7 321 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 H2AFJQ9BTM1 129 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 POLG2Q9UHN1 485 aa3.91□□□□□ -1.78
SMC4-219ENST00000487747 GUCY1B2O75343 617 aa3.9□□□□□ -1.79
SMC4-219ENST00000487747 MLYCDO95822 493 aa3.9□□□□□ -1.79
SMC4-219ENST00000487747 COX7A2P14406 83 aa3.9□□□□□ -1.79
SMC4-219ENST00000487747 PSMC2P35998 433 aaKnown RBP3.9□□□□□ -1.79
SMC4-219ENST00000487747 LMO4P61968 165 aa3.9□□□□□ -1.79
SMC4-219ENST00000487747 FGFBP1Q14512 234 aa3.9□□□□□ -1.79
SMC4-219ENST00000487747 DECR1Q16698 335 aa3.9□□□□□ -1.79
SMC4-219ENST00000487747 SIGIRRQ6IA17 410 aa3.9□□□□□ -1.79
SMC4-219ENST00000487747 LDHAL6AQ6ZMR3 332 aa3.9□□□□□ -1.79
SMC4-219ENST00000487747 ATG9AQ7Z3C6 839 aa3.9□□□□□ -1.79
SMC4-219ENST00000487747 SPATA5Q8NB90 893 aa3.9□□□□□ -1.79
SMC4-219ENST00000487747 IFIH1Q9BYX4 1025 aaKnown RBP3.9□□□□□ -1.79
SMC4-219ENST00000487747 TNPO2O14787 897 aaKnown RBP3.89□□□□□ -1.79
SMC4-219ENST00000487747 NCAM2O15394 837 aa3.89□□□□□ -1.79
SMC4-219ENST00000487747 PIP5K1CO60331 668 aa3.89□□□□□ -1.79
SMC4-219ENST00000487747 ZNF26P17031 533 aaPredicted RBP3.89□□□□□ -1.79
SMC4-219ENST00000487747 APOBEC1P41238 236 aaKnown RBP3.89□□□□□ -1.79
SMC4-219ENST00000487747 CLK1P49759 484 aaKnown RBP3.89□□□□□ -1.79
SMC4-219ENST00000487747 IRX1P78414 480 aaPredicted RBP3.89□□□□□ -1.79
SMC4-219ENST00000487747 TMEM187Q14656 261 aa3.89□□□□□ -1.79
SMC4-219ENST00000487747 ZC2HC1CQ53FD0 456 aaPredicted RBP3.89□□□□□ -1.79
SMC4-219ENST00000487747 RRM2BQ7LG56 351 aa3.89□□□□□ -1.79
SMC4-219ENST00000487747 PIWIL4Q7Z3Z4 852 aaKnown RBP3.89□□□□□ -1.79
SMC4-219ENST00000487747 MAP7D3Q8IWC1 876 aa3.89□□□□□ -1.79
SMC4-219ENST00000487747 TAAR8Q969N4 342 aa3.89□□□□□ -1.79
SMC4-219ENST00000487747 EIF2AK1Q9BQI3 630 aaKnown RBP3.89□□□□□ -1.79
SMC4-219ENST00000487747 FUZQ9BT04 418 aa3.89□□□□□ -1.79
SMC4-219ENST00000487747 GPR63Q9BZJ6 419 aa3.89□□□□□ -1.79
SMC4-219ENST00000487747 MARCH4Q9P2E8 410 aaPredicted RBP3.89□□□□□ -1.79
SMC4-219ENST00000487747 C2CD2Q9Y426 696 aa3.89□□□□□ -1.79
SMC4-219ENST00000487747 TCEA3O75764 348 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 HOXC8P31273 242 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 AHRP35869 848 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 FASLGP48023 281 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 LUMP51884 338 aaPredicted RBP3.88□□□□□ -1.79
SMC4-219ENST00000487747 PLIN5Q00G26 463 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 SPOCK1Q08629 439 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 KRTAP5-2Q701N4 177 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 GTSCR1Q86UQ5 136 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 GPR180Q86V85 440 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 WDR20Q8TBZ3 569 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 ARHGEF26Q96DR7 871 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 ZSCAN31Q96LW9 406 aaPredicted RBP3.88□□□□□ -1.79
SMC4-219ENST00000487747 ACOX2Q99424 681 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 ARPC5LQ9BPX5 153 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 PYGO2Q9BRQ0 406 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 BICC1Q9H694 974 aaKnown RBP3.88□□□□□ -1.79
SMC4-219ENST00000487747 FBXL2Q9UKC9 423 aa3.88□□□□□ -1.79
SMC4-219ENST00000487747 A0A1W2PQM1 296 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 EIF3FO00303 357 aaPredicted RBP3.87□□□□□ -1.79
SMC4-219ENST00000487747 WISP2O76076 250 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 LDHAP00338 332 aaKnown RBP3.87□□□□□ -1.79
SMC4-219ENST00000487747 TSHBP01222 138 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 IGLV1-44P01699 117 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 MAP2K2P36507 400 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 DSCR10P59022 87 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 USP41Q3LFD5 358 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 ZNF704Q6ZNC4 412 aaPredicted RBP3.87□□□□□ -1.79
SMC4-219ENST00000487747 ZNF473Q8WTR7 871 aaKnown RBP3.87□□□□□ -1.79
SMC4-219ENST00000487747 IGSF8Q969P0 613 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 ZNF653Q96CK0 615 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 ART5Q96L15 291 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 ASCL2Q99929 193 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 DCTN5Q9BTE1 182 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 ISCA1Q9BUE6 129 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 CDK19Q9BWU1 502 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 LRMDAQ9H2I8 198 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 SLC6A13Q9NSD5 602 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 TCP11L1Q9NUJ3 509 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 PAK5Q9P286 719 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 KLHL9Q9P2J3 617 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 PRSS21Q9Y6M0 314 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 UTYO14607 1347 aa3.87□□□□□ -1.79
SMC4-219ENST00000487747 A0A1W2PP11 408 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 OR5K3A6NET4 321 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 USP17L23D6RBM5 183 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 FAM90A26D6RGX4 464 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 CDAP32320 146 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 GABRB2P47870 512 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 GALNT2Q10471 571 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 GRIK2Q13002 908 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 CAMK1Q14012 370 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 DRAP1Q14919 205 aaPredicted RBP3.86□□□□□ -1.79
SMC4-219ENST00000487747 KRTCAP3Q53RY4 240 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 C6orf141Q5SZD1 244 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 DCST1Q5T197 706 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 DPPA4Q7L190 304 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 LRRTM4Q86VH4 590 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 THAP6Q8TBB0 222 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 ZCCHC10Q8TBK6 192 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 HCAR2Q8TDS4 363 aa3.86□□□□□ -1.79
SMC4-219ENST00000487747 NOC3LQ8WTT2 800 aaKnown RBP3.86□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms