RNA–Protein interactions for RNA: ENST00000480362.5

UPF3A-206, Transcript of UPF3A, regulator of nonsense mediated mRNA decay, humanhuman

TSL 5

Gene UPF3A, Length 965 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UPF3A-206ENST00000480362 TM7SF2O76062 418 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 DCNP07585 359 aaKnown RBP17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TBC1D3HP0C7X1 549 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TTPAP49638 278 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 ADPRHP54922 357 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 ITGA9Q13797 1035 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 ATP13A5Q4VNC0 1218 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 HENMT1Q5T8I9 393 aaKnown RBP17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TBC1D3GQ6DHY5 549 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TBC1D3CQ6IPX1 549 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 ANO7Q6IWH7 933 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 CERS6Q6ZMG9 384 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TRABD2AQ86V40 505 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 EXOC3L1Q86VI1 746 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 SERPINA9Q86WD7 417 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TBC1D3Q8IZP1 549 aaPredicted RBP17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TRAM1L1Q8N609 369 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 AP2M1Q96CW1 435 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 NUS1Q96E22 293 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 VPS39Q96JC1 886 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 TTC1Q99614 292 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 INTS10Q9NVR2 710 aaKnown RBP17.47■□□□□ 0.39
UPF3A-206ENST00000480362 ZFR2Q9UPR6 939 aaKnown RBP17.47■□□□□ 0.39
UPF3A-206ENST00000480362 CRYL1Q9Y2S2 319 aa17.47■□□□□ 0.39
UPF3A-206ENST00000480362 PRR23AA6NEV1 266 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 RNGTTO60942 597 aaKnown RBP17.46■□□□□ 0.39
UPF3A-206ENST00000480362 MT-ND3P03897 115 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 PPARGP37231 505 aaPredicted RBP17.46■□□□□ 0.39
UPF3A-206ENST00000480362 MAGOHP61326 146 aaKnown RBP17.46■□□□□ 0.39
UPF3A-206ENST00000480362 DBN1Q16643 649 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 ZNF284Q2VY69 593 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 RNF187Q5TA31 235 aaPredicted RBP17.46■□□□□ 0.39
UPF3A-206ENST00000480362 LYPLAL1Q5VWZ2 237 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 SEL1L3Q68CR1 1132 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 TIFABQ6ZNK6 161 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 ZNF765Q7L2R6 523 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 CNPY4Q8N129 248 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 DCLK2Q8N568 766 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 ACVR1CQ8NER5 493 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 ULK4Q96C45 1275 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 GPR22Q99680 433 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 PREBQ9HCU5 417 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 USP36Q9P275 1121 aaKnown RBP17.46■□□□□ 0.39
UPF3A-206ENST00000480362 TMPRSS11EQ9UL52 423 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 VPS9D1Q9Y2B5 631 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 LRRK1Q38SD2 2015 aa17.46■□□□□ 0.39
UPF3A-206ENST00000480362 FAM95CA0A1B0GW59 222 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 A0A1W2PQU0 124 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 UBA6A0AVT1 1052 aaPredicted RBP17.45■□□□□ 0.38
UPF3A-206ENST00000480362 FAM47DPA6NHR8 397 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 PDGFBP01127 241 aaPredicted RBP17.45■□□□□ 0.38
UPF3A-206ENST00000480362 ACRV1P26436 265 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 ACSL1P33121 698 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 CLCN5P51795 746 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 RPS21P63220 83 aaKnown RBP17.45■□□□□ 0.38
UPF3A-206ENST00000480362 MTAPQ13126 283 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 DNAJC3Q13217 504 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 SETMARQ53H47 684 aaPredicted RBP17.45■□□□□ 0.38
UPF3A-206ENST00000480362 TMEM31Q5JXX7 168 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 KIAA1161Q6NSJ0 714 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 NEK5Q6P3R8 708 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 NLRP8Q86W28 1048 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 PHF6Q8IWS0 365 aaKnown RBP eCLIP17.45■□□□□ 0.38
UPF3A-206ENST00000480362 SRRM1Q8IYB3 904 aaKnown RBP17.45■□□□□ 0.38
UPF3A-206ENST00000480362 NXPE1Q8N323 547 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 GPATCH11Q8N954 259 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 LPGAT1Q92604 370 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 KLK6Q92876 244 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 SERAC1Q96JX3 654 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 KLF6Q99612 283 aaPredicted RBP17.45■□□□□ 0.38
UPF3A-206ENST00000480362 ZSCAN5AQ9BUG6 496 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 BTBD1Q9H0C5 482 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 KDM4CQ9H3R0 1056 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 KCTD5Q9NXV2 234 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 SLC39A10Q9ULF5 831 aa17.45■□□□□ 0.38
UPF3A-206ENST00000480362 PLXNA2O75051 1894 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 FADS2P1A8MWK0 482 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 DCXO43602 365 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 OR1I1O60431 355 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 RFPL1O75677 317 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 APBB3O95704 486 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 CREB1P16220 341 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 SAT1P21673 171 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 OAS2P29728 719 aaKnown RBP17.44■□□□□ 0.38
UPF3A-206ENST00000480362 FMO4P31512 558 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 PTGER3P43115 390 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 POLD2P49005 469 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 DPTQ07507 201 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 ILF2Q12905 390 aaKnown RBP17.44■□□□□ 0.38
UPF3A-206ENST00000480362 SGCGQ13326 291 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 AGERQ15109 404 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 RBM20Q5T481 1227 aaKnown RBP17.44■□□□□ 0.38
UPF3A-206ENST00000480362 CWF19L1Q69YN2 538 aaKnown RBP17.44■□□□□ 0.38
UPF3A-206ENST00000480362 ZNF549Q6P9A3 640 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 HORMAD1Q86X24 394 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 SLC41A1Q8IVJ1 513 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 ELMO2Q96JJ3 720 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 UHRF1Q96T88 793 aaPredicted RBP17.44■□□□□ 0.38
UPF3A-206ENST00000480362 NDNQ99608 321 aa17.44■□□□□ 0.38
UPF3A-206ENST00000480362 C1QTNF2Q9BXJ5 285 aa17.44■□□□□ 0.38
Retrieved 100 of 20,778 RNA–protein pairs in 22 ms