RNA–Protein interactions for RNA: ENST00000480139.5

LIME1-205, Transcript of Lck interacting transmembrane adaptor 1, humanhuman

APPRIS ALT2 TSL 3 BASIC

Gene LIME1, Length 819 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIME1-205ENST00000480139 ACVR1Q04771 509 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 MORF4L2Q15014 288 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 SKIDA1Q1XH10 827 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 ALG11Q2TAA5 492 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 ATP13A5Q4VNC0 1218 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 IZUMO3Q5VZ72 239 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 FAM151BQ6UXP7 276 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 DBX2Q6ZNG2 339 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 PHYKPLQ8IUZ5 450 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 PHACTR4Q8IZ21 702 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 SAP25Q8TEE9 199 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 SCARF2Q96GP6 870 aaPredicted RBP19.59■□□□□ 0.73
LIME1-205ENST00000480139 SNF8Q96H20 258 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 DNAJC1Q96KC8 554 aaKnown RBP19.59■□□□□ 0.73
LIME1-205ENST00000480139 SERPINB12Q96P63 405 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 MRM3Q9HC36 420 aaKnown RBP19.59■□□□□ 0.73
LIME1-205ENST00000480139 FGF22Q9HCT0 170 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 KLF15Q9UIH9 416 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 FKBPLQ9UIM3 349 aa19.59■□□□□ 0.73
LIME1-205ENST00000480139 PNMA8BQ9ULN7 279 aaPredicted RBP19.59■□□□□ 0.73
LIME1-205ENST00000480139 AGAP14A8MT82 685 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 EFCAB8A8MWE9 144 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 GPR89AB7ZAQ6 455 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 INPP4BO15327 924 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 PIAS2O75928 621 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 SRP72O76094 671 aaKnown RBP19.58■□□□□ 0.72
LIME1-205ENST00000480139 SEC31AO94979 1220 aaKnown RBP19.58■□□□□ 0.72
LIME1-205ENST00000480139 CEACAM5P06731 702 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 GPR89BP0CG08 455 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 HK3P52790 923 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 SRP54P61011 504 aaKnown RBP19.58■□□□□ 0.72
LIME1-205ENST00000480139 PEX6Q13608 980 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 SUZ12Q15022 739 aaKnown RBP19.58■□□□□ 0.72
LIME1-205ENST00000480139 CHRNA6Q15825 494 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 CCDC38Q502W7 563 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 PRAMEF14Q5SWL7 426 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 TSTD2Q5T7W7 516 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 KANSL1Q7Z3B3 1105 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 PDXPQ96GD0 296 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 ERP44Q9BS26 406 aa19.58■□□□□ 0.72
LIME1-205ENST00000480139 PRSS38A1L453 326 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 SLC30A4O14863 429 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 SLC25A14O95258 325 aaPredicted RBP19.57■□□□□ 0.72
LIME1-205ENST00000480139 IVLP07476 585 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 CD59P13987 128 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 JUNDP17535 347 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 MGAT1P26572 445 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 NFATC2Q13469 925 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 HIBCHQ6NVY1 386 aaPredicted RBP19.57■□□□□ 0.72
LIME1-205ENST00000480139 BBOF1Q8ND07 529 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 OR13J1Q8NGT2 312 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 ZNF398Q8TD17 642 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 OR1E3Q8WZA6 343 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 TSACCQ96A04 125 aaPredicted RBP19.57■□□□□ 0.72
LIME1-205ENST00000480139 CDKN2AIPNLQ96HQ2 116 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 KIFC1Q9BW19 673 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 SLC13A1Q9BZW2 595 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 RMI1Q9H9A7 625 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 TRIM39Q9HCM9 518 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 SYBUQ9NX95 663 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 APOBEC3BQ9UH17 382 aaKnown RBP19.57■□□□□ 0.72
LIME1-205ENST00000480139 CDV3Q9UKY7 258 aaKnown RBP19.57■□□□□ 0.72
LIME1-205ENST00000480139 TMPRSS11EQ9UL52 423 aa19.57■□□□□ 0.72
LIME1-205ENST00000480139 ASCC3Q8N3C0 2202 aaKnown RBP19.56■□□□□ 0.72
LIME1-205ENST00000480139 CABIN1Q9Y6J0 2220 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 COL5A1P20908 1838 aaPredicted RBP19.56■□□□□ 0.72
LIME1-205ENST00000480139 MAGEB16A2A368 324 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 CTAGE15A4D2H0 777 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 FLRT2O43155 660 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 AVILO75366 819 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 TNFP01375 233 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 CTAGE8P0CG41 777 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 ITGALP20701 1170 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 DGKAP23743 735 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 IL9RQ01113 521 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 INAVAQ3KP66 663 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 GPR33Q49SQ1 333 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 ZNF542PQ5EBM4 170 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 SNX20Q7Z614 316 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 CTAGE6Q86UF2 777 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 TRIM74Q86UV6 250 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 HID1Q8IV36 788 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 CTAGE4Q8IX94 777 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 SDR16C5Q8N3Y7 309 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 MMGT1Q8N4V1 131 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 CEP112Q8N8E3 955 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 ZNF548Q8NEK5 533 aaPredicted RBP19.56■□□□□ 0.72
LIME1-205ENST00000480139 DDHD1Q8NEL9 900 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 SGSM3Q96HU1 749 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 RAB17Q9H0T7 212 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 CHRAC1Q9NRG0 131 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 TREX1Q9NSU2 369 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 SPASTQ9UBP0 616 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 SOX13Q9UN79 622 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 OAS3Q9Y6K5 1087 aaKnown RBP19.56■□□□□ 0.72
LIME1-205ENST00000480139 CSNK1G3Q9Y6M4 447 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 CEP250Q9BV73 2442 aa19.56■□□□□ 0.72
LIME1-205ENST00000480139 SDR42E2A6NKP2 422 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 GOLGA8MH3BSY2 632 aa19.55■□□□□ 0.72
LIME1-205ENST00000480139 TM4SF5O14894 197 aa19.55■□□□□ 0.72
Retrieved 100 of 20,778 RNA–protein pairs in 30 ms