RNA–Protein interactions for RNA: ENST00000477812.1

ACTB-210, Transcript of actin beta, humanhuman

TSL 2

Gene ACTB, Length 820 nt, Biotype retained intron, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-210ENST00000477812 LGR4Q9BXB1 951 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 ARRDC1-AS1Q9H2J1 176 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 CHMP2BQ9UQN3 213 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 RPS6KL1Q9Y6S9 549 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 PCDH15Q96QU1 1955 aa19.81■□□□□ 0.76
ACTB-210ENST00000477812 KNL1Q8NG31 2342 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 TRBV5-4A0A0C4DH59 114 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 OR51F1A6NGY5 319 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 PATE3B3GLJ2 98 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 LMNAP02545 664 aaKnown RBP19.8■□□□□ 0.76
ACTB-210ENST00000477812 THEGLP0DJG4 465 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 MYCLP1P12525 358 aaPredicted RBP19.8■□□□□ 0.76
ACTB-210ENST00000477812 TNFRSF8P28908 595 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 FOXN2P32314 431 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 PI4KAP42356 2102 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 CSNK1EP49674 416 aaKnown RBP19.8■□□□□ 0.76
ACTB-210ENST00000477812 KIAA1024LP59773 190 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 CRYMQ14894 314 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 HP1BP3Q5SSJ5 553 aaPredicted RBP19.8■□□□□ 0.76
ACTB-210ENST00000477812 RABEPKQ7Z6M1 372 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 SPATS2Q86XZ4 545 aaKnown RBP19.8■□□□□ 0.76
ACTB-210ENST00000477812 EIF1ADQ8N9N8 165 aaKnown RBP19.8■□□□□ 0.76
ACTB-210ENST00000477812 BTN2A2Q8WVV5 523 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 RUBCNQ92622 972 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 GLYATL1Q969I3 302 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 ZNF669Q96BR6 464 aaPredicted RBP19.8■□□□□ 0.76
ACTB-210ENST00000477812 PHOX2BQ99453 314 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 PLXNB3Q9ULL4 1909 aa19.8■□□□□ 0.76
ACTB-210ENST00000477812 TLR4O00206 839 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 UGT1A9O60656 530 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 GOT2P00505 430 aaKnown RBP19.79■□□□□ 0.76
ACTB-210ENST00000477812 PRSS56P0CW18 603 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 UGT1A6P19224 532 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 UGT1A1P22309 533 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 UGT1A4P22310 534 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 UGT1A3P35503 534 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 UGT1A5P35504 534 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 NXPH1P58417 271 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 ITGA9Q13797 1035 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 HLTFQ14527 1009 aaKnown RBP eCLIP19.79■□□□□ 0.76
ACTB-210ENST00000477812 NFATC4Q14934 902 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 DUOXA1Q1HG43 343 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 KHDC1Q4VXA5 237 aaKnown RBP19.79■□□□□ 0.76
ACTB-210ENST00000477812 SLC23A3Q6PIS1 610 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 AFTPHQ6ULP2 937 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 UNC5AQ6ZN44 842 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 SNX20Q7Z614 316 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 RELL1Q8IUW5 271 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 CCNJLQ8IV13 435 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 ANKMY2Q8IV38 441 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 PIANPQ8IYJ0 282 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 ZBED8Q8IZ13 594 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 FBXO36Q8NEA4 188 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 CEP76Q8TAP6 659 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 ZNF398Q8TD17 642 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 KLHDC7BQ96G42 594 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 HIC2Q96JB3 615 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 FMO2Q99518 471 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 UGT1A7Q9HAW7 530 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 UGT1A10Q9HAW8 530 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 UGT1A8Q9HAW9 530 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 SAYSD1Q9NPB0 183 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 ZC3H7BQ9UGR2 993 aaKnown RBP19.79■□□□□ 0.76
ACTB-210ENST00000477812 NOL12Q9UGY1 213 aaKnown RBP eCLIP19.79■□□□□ 0.76
ACTB-210ENST00000477812 NFU1Q9UMS0 254 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 OAS3Q9Y6K5 1087 aaKnown RBP19.79■□□□□ 0.76
ACTB-210ENST00000477812 FAM169AQ9Y6X4 670 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 V9GYY5 206 aaPredicted RBP19.79■□□□□ 0.76
ACTB-210ENST00000477812 LAMA1P25391 3075 aa19.79■□□□□ 0.76
ACTB-210ENST00000477812 SPTY2D1-AS1A0A0U1RR47 76 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 A0A1B0GVT2 93 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 INPP4BO15327 924 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 VAPBO95292 243 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 TTC4O95801 387 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 MYBL2P10244 700 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 ITGALP20701 1170 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 CDKN1CP49918 316 aaPredicted RBP19.78■□□□□ 0.76
ACTB-210ENST00000477812 PRAMEP78395 509 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 CACNG1Q06432 222 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 FZD2Q14332 565 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 TEAD4Q15561 434 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 CCDC6Q16204 474 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 GPR33Q49SQ1 333 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 KCTD16Q68DU8 428 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 PSAPL1Q6NUJ1 521 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 MACC1Q6ZN28 852 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 TRIM74Q86UV6 250 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 DDHD1Q8NEL9 900 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 SMOC1Q9H4F8 434 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 ASB8Q9H765 288 aa19.78■□□□□ 0.76
ACTB-210ENST00000477812 PHPT1Q9NRX4 125 aaPredicted RBP19.78■□□□□ 0.76
ACTB-210ENST00000477812 MARCH4Q9P2E8 410 aaPredicted RBP19.78■□□□□ 0.76
ACTB-210ENST00000477812 MTRF1LQ9UGC7 380 aaKnown RBP19.78■□□□□ 0.76
ACTB-210ENST00000477812 PNMA8BQ9ULN7 279 aaPredicted RBP19.78■□□□□ 0.76
ACTB-210ENST00000477812 WDR87Q6ZQQ6 2873 aa19.77■□□□□ 0.76
ACTB-210ENST00000477812 TMEM202A6NGA9 273 aa19.77■□□□□ 0.76
ACTB-210ENST00000477812 POLBP06746 335 aa19.77■□□□□ 0.76
ACTB-210ENST00000477812 CTSKP43235 329 aa19.77■□□□□ 0.76
ACTB-210ENST00000477812 PDE1CQ14123 709 aaPredicted RBP19.77■□□□□ 0.76
ACTB-210ENST00000477812 FRG1Q14331 258 aaKnown RBP19.77■□□□□ 0.76
Retrieved 100 of 20,778 RNA–protein pairs in 21.5 ms