RNA–Protein interactions for RNA: ENST00000475189.1

SRM-204, Transcript of spermidine synthase, humanhuman

TSL 2

Gene SRM, Length 545 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SRM-204ENST00000475189 NAP1L3Q99457 506 aaPredicted RBP16.1■□□□□ 0.17
SRM-204ENST00000475189 AP1M1Q9BXS5 423 aa16.1■□□□□ 0.17
SRM-204ENST00000475189 SUDS3Q9H7L9 328 aaPredicted RBP16.1■□□□□ 0.17
SRM-204ENST00000475189 IL26Q9NPH9 171 aa16.1■□□□□ 0.17
SRM-204ENST00000475189 RAB6BQ9NRW1 208 aa16.1■□□□□ 0.17
SRM-204ENST00000475189 KCND1Q9NSA2 647 aa16.1■□□□□ 0.17
SRM-204ENST00000475189 KCTD3Q9Y597 815 aa16.1■□□□□ 0.17
SRM-204ENST00000475189 U3KQA8 63 aa16.1■□□□□ 0.17
SRM-204ENST00000475189 C2orf81A6NN90 581 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 ERI2A8K979 691 aaKnown RBP16.09■□□□□ 0.17
SRM-204ENST00000475189 STX7O15400 261 aaKnown RBP16.09■□□□□ 0.17
SRM-204ENST00000475189 PPFIA2O75334 1257 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 TRIM16O95361 564 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 ASMTLO95671 621 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 TOP3BO95985 862 aaKnown RBP16.09■□□□□ 0.17
SRM-204ENST00000475189 CKMT1AP12532 417 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 TPH1P17752 444 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 ACP1P24666 158 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 SPAM1P38567 509 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 GNPDA1P46926 289 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 DAB2P98082 770 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 FOXC1Q12948 553 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 SEMA5AQ13591 1074 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 C6orf132Q5T0Z8 1188 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 ZDHHC20Q5W0Z9 365 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 TTC27Q6P3X3 843 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 LVRNQ6Q4G3 990 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 C4orf22Q6V702 233 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 MARK2Q7KZI7 788 aaKnown RBP16.09■□□□□ 0.17
SRM-204ENST00000475189 GSTA5Q7RTV2 222 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 RAB44Q7Z6P3 723 aaPredicted RBP16.09■□□□□ 0.17
SRM-204ENST00000475189 OR4K2Q8NGD2 314 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 DTX3LQ8TDB6 740 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 GPBAR1Q8TDU6 330 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 ADAMTS14Q8WXS8 1223 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 GLYATL1Q969I3 302 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 BOCQ9BWV1 1114 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 TRNAU1APQ9NX07 287 aaKnown RBP16.09■□□□□ 0.17
SRM-204ENST00000475189 IGF2BP1Q9NZI8 577 aaKnown RBP eCLIP16.09■□□□□ 0.178e-17■□□□□ 8.9
SRM-204ENST00000475189 VPS18Q9P253 973 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 TMPRSS11EQ9UL52 423 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 DOLKQ9UPQ8 538 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 WASF3Q9UPY6 502 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 PKP3Q9Y446 797 aa16.09■□□□□ 0.17
SRM-204ENST00000475189 GAPDHSO14556 408 aaPredicted RBP16.08■□□□□ 0.16
SRM-204ENST00000475189 DNAJC6O75061 913 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 SUN1O94901 812 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 SLC25A14O95258 325 aaPredicted RBP16.08■□□□□ 0.16
SRM-204ENST00000475189 CRTAMO95727 393 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 TCP1P17987 556 aaKnown RBP16.08■□□□□ 0.16
SRM-204ENST00000475189 ADCY8P40145 1251 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 CHRNA6Q15825 494 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 CYP1B1Q16678 543 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 KCTD19Q17RG1 926 aaPredicted RBP16.08■□□□□ 0.16
SRM-204ENST00000475189 ATP13A5Q4VNC0 1218 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 PYCR3Q53H96 274 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 CCDC157Q569K6 752 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 ZNF648Q5T619 568 aaPredicted RBP16.08■□□□□ 0.16
SRM-204ENST00000475189 PAPD7Q5XG87 772 aaKnown RBP16.08■□□□□ 0.16
SRM-204ENST00000475189 FAM151BQ6UXP7 276 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 TAF8Q7Z7C8 310 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 LINC00523Q86TU6 105 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 NRROSQ86YC3 692 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 C17orf53Q8N3J3 647 aaPredicted RBP16.08■□□□□ 0.16
SRM-204ENST00000475189 CHCHD4Q8N4Q1 142 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 OR52K1Q8NGK4 314 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 SCG3Q8WXD2 468 aaKnown RBP16.08■□□□□ 0.16
SRM-204ENST00000475189 MAGOHBQ96A72 148 aaKnown RBP16.08■□□□□ 0.16
SRM-204ENST00000475189 VPS35Q96QK1 796 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 ARFGAP3Q9NP61 516 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 PIH1D1Q9NWS0 290 aaKnown RBP16.08■□□□□ 0.16
SRM-204ENST00000475189 PCDHGA1Q9Y5H4 931 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 PCYT1BQ9Y5K3 369 aaPredicted RBP16.08■□□□□ 0.16
SRM-204ENST00000475189 ST14Q9Y5Y6 855 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 KNTC1P50748 2209 aa16.08■□□□□ 0.16
SRM-204ENST00000475189 GLYATL1P3A0A0U1RQE8 302 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 LDB2O43679 373 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 HYAL3O43820 417 aaPredicted RBP16.07■□□□□ 0.16
SRM-204ENST00000475189 UGT1A9O60656 530 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 RFPL3O75679 317 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 UGT1A6P19224 532 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 UGT1A1P22309 533 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 UGT1A4P22310 534 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 CA5AP35218 305 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 UGT1A3P35503 534 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 UGT1A5P35504 534 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 COILP38432 576 aaPredicted RBP16.07■□□□□ 0.16
SRM-204ENST00000475189 GRIA1P42261 906 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 LMAN1P49257 510 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 ZNF140P52738 457 aaPredicted RBP16.07■□□□□ 0.16
SRM-204ENST00000475189 PDE1BQ01064 536 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 CTBSQ01459 385 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 ADGRG6Q86SQ4 1221 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 PHYKPLQ8IUZ5 450 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 SLC35F3Q8IY50 421 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 OR13C4Q8NGS5 318 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 GLMNQ92990 594 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 OR2M4Q96R27 311 aa16.07■□□□□ 0.16
SRM-204ENST00000475189 NAPGQ99747 312 aaPredicted RBP16.07■□□□□ 0.16
SRM-204ENST00000475189 OR2AG1Q9H205 316 aa16.07■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 43.5 ms