RNA–Protein interactions for RNA: ENST00000468468.5

TSPAN4-211, Transcript of tetraspanin 4, humanhuman

TSL 2

Gene TSPAN4, Length 2,777 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-211ENST00000468468 PATJQ8NI35 1801 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 FXYD1O00168 92 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 PIRTP0C851 137 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 SLC6A2P23975 617 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 PSMA4P25789 261 aaKnown RBP15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 ACVR1Q04771 509 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 BNIP2Q12982 314 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 EPHX4Q8IUS5 362 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 PACRGLQ8N7B6 248 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 LRRC58Q96CX6 371 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 SLC45A3Q96JT2 553 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 GLT1D1Q96MS3 346 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 ATOH8Q96SQ7 321 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 TRIM8Q9BZR9 551 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 SMOXQ9NWM0 555 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 POLG2Q9UHN1 485 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 SCML2Q9UQR0 700 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 TANC1Q9C0D5 1861 aa15.72■□□□□ 0.11
TSPAN4-211ENST00000468468 CLASP2O75122 1294 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 RPP40O75818 363 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 GNAO1P09471 354 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 TYMPP19971 482 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 FASP25445 335 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 NOGQ13253 232 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 GALNT3Q14435 633 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 POLD3Q15054 466 aaPredicted RBP15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 INTS11Q5TA45 600 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 RAP1GAP2Q684P5 730 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 FBXL22Q6P050 247 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 TTC33Q6PID6 262 aaPredicted RBP15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 TRAF7Q6Q0C0 670 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 CIR1Q86X95 450 aaPredicted RBP15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 MFSD2AQ8NA29 543 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 RHEBL1Q8TAI7 183 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 HHIPL1Q96JK4 782 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 FEM1CQ96JP0 617 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 TFB2MQ9H5Q4 396 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 SDR39U1Q9NRG7 319 aaPredicted RBP15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 AGPAT4Q9NRZ5 378 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 ACTR3BQ9P1U1 418 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 GMEB1Q9Y692 573 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 MYO16Q9Y6X6 1858 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 RNF103-CHMP3A0A140T963 221 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 A0A1B0GTL3 188 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 SUPT3HB4E1H0 165 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 DLGAP1O14490 977 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 BMP10O95393 424 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 MATN4O95460 622 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 HOXB8P17481 243 aaPredicted RBP15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 EEF1DP29692 281 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 SUOXP51687 545 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 TMED1Q13445 227 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 FBXO48Q5FWF7 155 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 CLLU1OSQ5K130 101 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 LCN8Q6JVE9 175 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 ZNF786Q8N393 782 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 ATP6V0D2Q8N8Y2 350 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 GPR150Q8NGU9 434 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 OR4L1Q8NH43 312 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 GAB3Q8WWW8 586 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 AARSD1Q9BTE6 412 aaKnown RBP15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 SEMA4BQ9NPR2 832 aaPredicted RBP15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 CATSPERZQ9NTU4 200 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 GMIPQ9P107 970 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 CASP8AP2Q9UKL3 1982 aa15.71■□□□□ 0.11
TSPAN4-211ENST00000468468 ARPC2O15144 300 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 RAMP2O60895 175 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 TBX18O95935 607 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 PRSS56P0CW18 603 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 ECT2LQ008S8 904 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 CLCQ05315 142 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 IL10RBQ08334 325 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 CMTR2Q8IYT2 770 aaKnown RBP15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 UROC1Q96N76 676 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 PHF12Q96QT6 1004 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 POPDC3Q9HBV1 291 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 PRG3Q9Y2Y8 225 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 UBA6A0AVT1 1052 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 CRCPO75575 148 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 HMBSP08397 361 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 OXTRP30559 389 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 ACVRL1P37023 503 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 DIO3P55073 304 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 MERTKQ12866 999 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 BLOC1S3Q6QNY0 202 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 GLB1LQ6UWU2 654 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 IFNEQ86WN2 208 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 MIB1Q86YT6 1006 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 ADGRG5Q8IZF4 528 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 FBXO39Q8N4B4 442 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 DNAJB14Q8TBM8 379 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 C9orf16Q9BUW7 83 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 ADI1Q9BV57 179 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 POLR1EQ9GZS1 481 aaKnown RBP15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 RNF112Q9ULX5 631 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 TIMM22Q9Y584 194 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 HEMK1Q9Y5R4 338 aaPredicted RBP15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 IGLV3-10A0A075B6K4 115 aa15.7■□□□□ 0.1
TSPAN4-211ENST00000468468 A0A087WXM4 84 aa15.7■□□□□ 0.1
Retrieved 100 of 20,778 RNA–protein pairs in 25.1 ms