RNA–Protein interactions for RNA: ENST00000466624.1

GPC1-207, Transcript of glypican 1, humanhuman

TSL 2

Gene GPC1, Length 782 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-207ENST00000466624 TEX264Q9Y6I9 313 aa15.89■□□□□ 0.13
GPC1-207ENST00000466624 TRBV5-4A0A0C4DH59 114 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 A0A1B0GVT2 93 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 KHNYNO15037 678 aaKnown RBP15.88■□□□□ 0.13
GPC1-207ENST00000466624 CFIP05156 583 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 POLBP06746 335 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 SYPP08247 313 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 RHOXF2BP0C7M4 288 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 PAMP19021 973 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 ITGALP20701 1170 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 NMBRP28336 390 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 MC4RP32245 332 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 CTSKP43235 329 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 ARSDP51689 593 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 TMPRSS15P98073 1019 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 NFATC2Q13469 925 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 PDE1CQ14123 709 aaPredicted RBP15.88■□□□□ 0.13
GPC1-207ENST00000466624 CHRNA6Q15825 494 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 CSRP2Q16527 193 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 ANKRD20A4Q4UJ75 823 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 ATP13A5Q4VNC0 1218 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 TEX35Q5T0J7 233 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 AFTPHQ6ULP2 937 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 IL27RAQ6UWB1 636 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 CEP128Q6ZU80 1094 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 PHYKPLQ8IUZ5 450 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 OXR1Q8N573 874 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 EIF1ADQ8N9N8 165 aaKnown RBP15.88■□□□□ 0.13
GPC1-207ENST00000466624 ZNF398Q8TD17 642 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 BTN2A2Q8WVV5 523 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 GLYATL1Q969I3 302 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 ULK4Q96C45 1275 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 MFSD3Q96ES6 412 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 PWWP2AQ96N64 755 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 HINFPQ9BQA5 517 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 RHOXF2Q9BQY4 288 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 TSPYL1Q9H0U9 437 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 ASB8Q9H765 288 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 MTRF1LQ9UGC7 380 aaKnown RBP15.88■□□□□ 0.13
GPC1-207ENST00000466624 SLC2A6Q9UGQ3 507 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 MAD1L1Q9Y6D9 718 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 SLC30A1Q9Y6M5 507 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 RPS6KL1Q9Y6S9 549 aa15.88■□□□□ 0.13
GPC1-207ENST00000466624 ZCWPW2A0A1B0GU75 182 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 CCDC78A2IDD5 438 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 PATE3B3GLJ2 98 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 ARHGAP33O14559 1287 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 TNFRSF10CO14798 259 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 ELK3P41970 407 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 PRAMEP78395 509 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 BNC1Q01954 994 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 CACNG1Q06432 222 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 PDIA2Q13087 525 aaKnown RBP15.87■□□□□ 0.13
GPC1-207ENST00000466624 LDLRAP1Q5SW96 308 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 LAYNQ6UX15 382 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 KDM7AQ6ZMT4 941 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 PARGQ86W56 976 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 SPATS2Q86XZ4 545 aaKnown RBP15.87■□□□□ 0.13
GPC1-207ENST00000466624 DDHD1Q8NEL9 900 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 OR4L1Q8NH43 312 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 HDAC10Q969S8 669 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 WDR92Q96MX6 357 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 PHOX2BQ99453 314 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 WDR83Q9BRX9 315 aaKnown RBP15.87■□□□□ 0.13
GPC1-207ENST00000466624 LGR4Q9BXB1 951 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 VPS18Q9P253 973 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 RAPGEFL1Q9UHV5 662 aa15.87■□□□□ 0.13
GPC1-207ENST00000466624 FNDC3AQ9Y2H6 1198 aaKnown RBP15.87■□□□□ 0.13
GPC1-207ENST00000466624 CCDC162PA2VCL2 907 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 GPR89AB7ZAQ6 455 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 CCL22O00626 93 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 DFNA5O60443 496 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 BANF1O75531 89 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 SLC25A14O95258 325 aaPredicted RBP15.86■□□□□ 0.13
GPC1-207ENST00000466624 GOT2P00505 430 aaKnown RBP15.86■□□□□ 0.13
GPC1-207ENST00000466624 GPR89BP0CG08 455 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 ECHS1P30084 290 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 FOXN2P32314 431 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 ARCN1P48444 511 aaKnown RBP15.86■□□□□ 0.13
GPC1-207ENST00000466624 GRIK2Q13002 908 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 FRG1Q14331 258 aaKnown RBP15.86■□□□□ 0.13
GPC1-207ENST00000466624 FZD2Q14332 565 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 ZNF423Q2M1K9 1284 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 KIF19Q2TAC6 998 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 SPANXN3Q5MJ09 141 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 TPRG1LQ5T0D9 272 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 STEAP4Q687X5 459 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 LMNTD2Q8IXW0 634 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 GPR161Q8N6U8 529 aaKnown RBP15.86■□□□□ 0.13
GPC1-207ENST00000466624 OR56A4Q8NGH8 313 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 IFT81Q8WYA0 676 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 TBRG4Q969Z0 631 aaKnown RBP eCLIP15.86■□□□□ 0.13
GPC1-207ENST00000466624 ZNF669Q96BR6 464 aaPredicted RBP15.86■□□□□ 0.13
GPC1-207ENST00000466624 SUDS3Q9H7L9 328 aaPredicted RBP15.86■□□□□ 0.13
GPC1-207ENST00000466624 SEMA4GQ9NTN9 838 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 ZC3H7BQ9UGR2 993 aaKnown RBP15.86■□□□□ 0.13
GPC1-207ENST00000466624 CRLS1Q9UJA2 301 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 TMPRSS11EQ9UL52 423 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 CHMP2BQ9UQN3 213 aa15.86■□□□□ 0.13
GPC1-207ENST00000466624 SLC17A4Q9Y2C5 497 aa15.86■□□□□ 0.13
Retrieved 100 of 20,778 RNA–protein pairs in 23.2 ms